DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007639
GeneFoxj3
SynonymsFhd6
Descriptionforkhead box J3
LocusNM_172699 UCSC: chr4:119212293-119301724(+) OLP: chr4:119212293-119301724(+)
DB links


Entrez 230700
MGI 2443432
Ensembl ENSMUSG00000032998
Vega OTTMUSG00000009437
Featureprotein-coding
GO_BP
  •   9 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      pattern specification process (GO:0007389)
      embryo development (GO:0009790)
      tissue development (GO:0009888)
      positive regulation of transcription, DNA-dependent (GO:0045893)
      organ development (GO:0048513)
      regulation of sequence-specific DNA binding transcription factor activity (GO:0051090)
GO_MF
  •   8 Terms
      DNA binding (GO:0003677)
      double-stranded DNA binding (GO:0003690)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity (GO:0003705)
      transcription factor binding (GO:0008134)
      DNA binding, bending (GO:0008301)
      protein domain specific binding (GO:0019904)
      sequence-specific DNA binding (GO:0043565)
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2007566 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007639
(v1.0)		Foxj3NM_172699230700
204.234293.017194.95745.22867.19477
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007639
(v1.0)		Foxj3NM_172699230700
213.5452.52801319.688
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007639
(v1.0)		Foxj3NM_172699230700
208.441290.075326.658
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007639
(v1.0)		Foxj3NM_172699230700
213.6692.49339358.268
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007639
(v1.0)		Foxj3NM_172699230700
180.543.670144.5607
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007639
(v1.0)		Foxj3NM_172699230700
332.95250.994
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007639
(v1.0)		Foxj3NM_172699230700
7.692536.69422
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007639
(v1.0)		17298K0602A05-3Mm.31178C330039G02230700
U004742NAP003880-002TC805703U,F,22.64932.57452.47682.41872.24492.20642.2668
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007639
(v1.0)		1435362_atMm.259227Foxj3NM_172699.2230700
2257.572061.954222.77347.475353.05
0007639
(v1.0)		1438220_atMm.259227Foxj3NM_172699.2230700
284.225402.6751367.72038.8
0007639
(v1.0)		1459055_atMm.259227Foxj3NM_172699.2230700
001229.300
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0007639
(v1.0)		A_52_P508030Foxj3NM_172699230700
11P0.8650.385P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0007639
(v1.0)		Foxj3230700
010020