DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007648
GeneFoxn3
SynonymsChes1
Ches1l
HTLFL1
Descriptionforkhead box N3
LocusNM_183186 UCSC: chr12:100433304-100688284(-) OLP: chr12:100433304-100688284(-)
DB links


Entrez 71375
MGI 1918625
Ensembl ENSMUSG00000033713
Vega OTTMUSG00000042153
Featureprotein-coding
GO_BP
  •   9 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      cell cycle (GO:0007049)
      pattern specification process (GO:0007389)
      embryo development (GO:0009790)
      tissue development (GO:0009888)
      negative regulation of transcription, DNA-dependent (GO:0045892)
      regulation of sequence-specific DNA binding transcription factor activity (GO:0051090)
GO_MF
  •   8 Terms
      DNA binding (GO:0003677)
      double-stranded DNA binding (GO:0003690)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity (GO:0003705)
      protein C-terminus binding (GO:0008022)
      transcription factor binding (GO:0008134)
      DNA binding, bending (GO:0008301)
      sequence-specific DNA binding (GO:0043565)
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2007575 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007648
(v1.0)		Foxn3NM_18318671375
30.202638.713422.993128.008312.6748
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007648
(v1.0)		Foxn3NM_18318671375
31.57961.4690742.2372
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007648
(v1.0)		Foxn3NM_18318671375
30.824838.324742.4929
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007648
(v1.0)		Foxn3NM_18318671375
31.59791.4489446.6048
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007648
(v1.0)		Foxn3NM_18318671375
21.288127.043130.6224
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007648
(v1.0)		Foxn3NM_18318671375
31.507417.464
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007648
(v1.0)		Foxn3NM_18318671375
2.260413.27465
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007648
(v1.0)		2592C0340G04-3Mm.87594Ches171375
U034255NAP094429-001Ches1;TC799255Q9CU83U,F3.07613.21882.59012.77512.72862.87562.819
0007648
(v1.0)		9001H3075C04-3Mm.87594Ches171375
U034255NAP094429-001Ches1;TC799255Q9CU83U,F2.87582.83442.60132.98482.70852.72772.6832
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007648
(v1.0)		1434002_atMm.392143Foxn371375
274.8750246.9587.325359.5
0007648
(v1.0)		1436925_atMm.392143Foxn371375
319.1415.525238.425265.550
0007648
(v1.0)		1438255_atMm.392143Foxn371375
499.55838.75388.3410.825201.25
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0007648
(v1.0)		A_51_P172344Ches1NM_18318671375
11P0.5210.103P
0007648
(v1.0)		A_52_P289835Ches1NM_18318671375
11P0.3290.0572P
Proteome N/A