DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0007730

Gene

Fundc1

Synonyms

Description

FUN14 domain containing 1

Locus

NM_028058 UCSC: chrX:17133695-17149423(-) OLP: chrX:17133695-17149423(-)

DB links

Entrez 72018
MGI 1919268
Ensembl ENSMUSG00000025040
Vega OTTMUSG00000016945

Feature

protein-coding

GO_BP

3 Terms

GO_MF

GO_CC

5 Terms

KEGG

see DBTMEE:2007658 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0007730 (v1.0)	Fundc1	NM_028058	72018	4.01704	7.52119	11.3478	19.36	11.5506

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0007730 (v1.0)	Fundc1	NM_028058	72018	4.20019	3.59032	8.20578

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0007730 (v1.0)	Fundc1	NM_028058	72018	4.0998	7.44567	4.21441

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0007730 (v1.0)	Fundc1	NM_028058	72018	4.20263	3.54114	4.62222

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0007730 (v1.0)	Fundc1	NM_028058	72018	10.5063	18.6928	27.5673

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0007730 (v1.0)	Fundc1	NM_028058	72018	2.23809	5.39731

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0007730 (v1.0)	Fundc1	NM_028058	72018	5.57172	9.89197

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0007730 (v1.0)	7865	H3055D12-3	Mm.41558	1500005J14Rik	72018	U039286	NAP090387-1	1500005J14Rik;	TC909877,TC909876	Q9DB70	U,F,2	3.0114	3.0632	2.756	2.4217	2.4968	2.6702	2.7469
0007730 (v1.0)	18715	L0223H02-3	Mm.41558	1500005J14Rik	72018	U039286	NAP098887-001	1500005J14Rik;	TC909876	Q9DB70	U,F,2	3.2754	3.309	3.3573	3.2859	3.4204	3.4172	3.3759

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0007730 (v1.0)	1424215_at	Mm.41558	Fundc1	NM_028058.3	72018	69.85	76.45	87.85	202.35	424.275
0007730 (v1.0)	1453369_a_at	Mm.41558	Fundc1	NM_028058.3	72018	119.25	182.425	2638.32	82.175	135.4

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0007730 (v1.0)	A_51_P271725	Fundc1	NM_028058	72018	1	1	P	1.33	0.253	P

N/A