DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0008071

Gene

Glcci1

Synonyms

Fam117c
GIG18
Tssn1

Description

glucocorticoid induced transcript 1

Locus

NM_133236 UCSC: chr6:8459596-8547548(+) OLP: chr6:8459596-8547548(+)

DB links

Entrez 170772
MGI 2179717
Ensembl ENSMUSG00000029638
Vega OTTMUSG00000030314

Feature

protein-coding

GO_BP

GO_MF

1 Terms

GO_CC

1 Terms

KEGG

see (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0008071 (v1.0)	Glcci1	NM_133236	170772	51.4035	55.8012	51.5957	15.8606	2.23129

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0008071 (v1.0)	Glcci1	NM_133236	170772	53.747	4.89264	60.8804

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0008071 (v1.0)	Glcci1	NM_133236	170772	52.4624	55.2409	56.6217

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0008071 (v1.0)	Glcci1	NM_133236	170772	53.7783	4.82563	62.1007

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0008071 (v1.0)	Glcci1	NM_133236	170772	47.7696	15.314	19.4505

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0008071 (v1.0)	Glcci1	NM_133236	170772	46.9981	43.4831

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0008071 (v1.0)	Glcci1	NM_133236	170772	22.8537	32.5402

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0008071 (v1.0)	8333	H3063H06-3		Glcci1	170772	U006533	NAP088651-1		TC815572	Q925C1	U,F,2	4.5857	4.5541	3.8882	3.8552	2.999	2.9123	2.9789
0008071 (v1.0)	12807	H3152F08-3	Mm.27320	Glcci1	170772	U006533	NAP099820-001	2310047L21Rik;Glcci1;		Q925C1	U,F,2	4.0733	3.9976	3.7575	3.5527	3.136	3.3951	3.1067

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0008071 (v1.0)	1426218_at	Mm.210787	Glcci1	NM_133236.2	170772	210.975	224.7	126.8	0	0
0008071 (v1.0)	1451972_at	Mm.210787	Glcci1	NM_133236.2	170772	452.6	929	658.675	0	0

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0008071 (v1.0)	A_51_P199425	Glcci1	NM_133236	170772	1	1	P	0.876	0.411	P
0008071 (v1.0)	A_52_P370935	Glcci1	NM_178072	170772	1	1	P	1.664	0.123	P

N/A