DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0009584

Gene

Gpt2

Synonyms

ALT2

Description

glutamic pyruvate transaminase (alanine aminotransferase) 2

Locus

NM_173866 UCSC: chr8:88016516-88051457(+) OLP: chr8:88016516-88051457(+)

DB links

Entrez 108682
MGI 1915391
Ensembl ENSMUSG00000031700
Vega OTTMUSG00000023224

Feature

protein-coding

GO_BP

3 Terms

GO_MF

5 Terms

GO_CC

1 Terms

KEGG

4 Terms

see DBTMEE:2009461 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0009584 (v1.0)	Gpt2	NM_173866	108682	16.886	19.1382	19.0807	9.62903	6.70258

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0009584 (v1.0)	Gpt2	NM_173866	108682	17.6558	8.31965	20.8802

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0009584 (v1.0)	Gpt2	NM_173866	108682	17.2338	18.946	25.4466

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0009584 (v1.0)	Gpt2	NM_173866	108682	17.6661	8.2057	27.909

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0009584 (v1.0)	Gpt2	NM_173866	108682	17.6658	9.29722	10.6366

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0009584 (v1.0)	Gpt2	NM_173866	108682	12.2504	16.3866

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0009584 (v1.0)	Gpt2	NM_173866	108682	11.3846	11.7005

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0009584 (v1.0)	9571	H3083D09-3	Mm.200423	4631422C05Rik	108682	U009598	NAP004944-001		TC881008,TC881006,TC881005		U,F,2	2.7898	2.763	2.8406	2.9198	3.2821	2.9389	3.1058

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0009584 (v1.0)	1438385_s_at	Mm.200423	Gpt2	NM_173866.3	108682	102.975	89.025	215.8	30.85	42
0009584 (v1.0)	1434542_at	Mm.200423	Gpt2	NM_173866.3	108682	0	66.825	67.15	0	0
0009584 (v1.0)	1439029_at	Mm.200423	Gpt2	NM_173866.3	108682	0	0	379.075	0	0

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0009584 (v1.0)	A_51_P493886	Gpt2	NM_173866	108682	1	1	P	0.628	0.136	P

N/A