DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0010022

Gene

Hic2

Synonyms

HRG22

Description

hypermethylated in cancer 2

Locus

NM_178922 UCSC: chr16:17233680-17263523(+) OLP: chr16:17233680-17263523(+)

DB links

Entrez 58180
MGI 1929869
Ensembl ENSMUSG00000050240
Vega OTTMUSG00000038081

Feature

protein-coding

GO_BP

2 Terms

GO_MF

5 Terms

GO_CC

4 Terms

KEGG

see DBTMEE:2009903 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0010022 (v1.0)	Hic2	NM_178922	58180	8.15899	12.5808	33.6396	13.0958	0.597356

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0010022 (v1.0)	Hic2	NM_178922	58180	8.53098	0.273429	13.7259

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0010022 (v1.0)	Hic2	NM_178922	58180	8.32708	12.4545	18.4142

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0010022 (v1.0)	Hic2	NM_178922	58180	8.53593	0.269684	20.1961

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0010022 (v1.0)	Hic2	NM_178922	58180	31.145	12.6445	14.0905

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0010022 (v1.0)	Hic2	NM_178922	58180	10.4423	18.9576

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0010022 (v1.0)	Hic2	NM_178922	58180	7.28537	8.87383

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0010022 (v1.0)	5996	H3014E05-3	Mm.29903	AA409108	106112	U043499	NAP002275-001	Hic2;	TC801039	Q9JLZ6	U,F,2	3.5214	3.1433	3.0254	3.4288	2.9307	2.9968	3.0423
0010022 (v1.0)	6189	H3020B12-3	Mm.17800			U043499	NAP025018-001	Hic2;	TC854821	Q9JLZ6	U,F,2	4.1311	4.2685	4.5698	4.4177	4.1903	4.4836	4.3789

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0010022 (v1.0)	1454944_at	Mm.261602	Hic2	NM_178922.3	58180	0	0	1225.32	1035.25	1596.72

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0010022 (v1.0)	A_52_P234354	Hic2	NM_178922	58180	1	1	P	1.234	0.282	P
0010022 (v1.0)	A_52_P623457	Hic2	NM_178922	58180	1	1	P	0.954	0.718	P

N/A