DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010128
GeneHmg20a
SynonymsHmgxb1
Descriptionhigh mobility group 20A
LocusNM_025812 UCSC: chr9:56266653-56344743(+) OLP: chr9:56266653-56344743(+)
DB links


Entrez 66867
MGI 1914117
Ensembl ENSMUSG00000032329
Featureprotein-coding
GO_BP
  •   5 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      chromatin modification (GO:0016568)
      negative regulation of neuron differentiation (GO:0045665)
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2010011 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010128
(v1.0)		Hmg20aNM_02581266867
51.346947.60136.702013.905658.69262
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010128
(v1.0)		Hmg20aNM_02581266867
53.68793.6383551.934
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010128
(v1.0)		Hmg20aNM_02581266867
52.404747.123351.4066
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010128
(v1.0)		Hmg20aNM_02581266867
53.71913.5885256.381
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010128
(v1.0)		Hmg20aNM_02581266867
6.205023.771065.42558
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010128
(v1.0)		Hmg20aNM_02581266867
41.14312.40086
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010128
(v1.0)		Hmg20aNM_02581266867
10.850810.4531
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010128
(v1.0)		11468H3116A12-3Mm.150856Hmg20a66867
U010525NAP095190-001Hmg20a;TC941649Q9CYG2U,F3.44533.40413.68623.44753.25763.41343.2509
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010128
(v1.0)		1416722_atMm.150856Hmg20aNM_025812.266867
570.55715.925218.075109.625178.575
0010128
(v1.0)		1428920_atMm.150856Hmg20aNM_025812.266867
23.750000
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0010128
(v1.0)		A_51_P468780Hmg20aNM_02581266867
11P0.610.127P
0010128
(v1.0)		A_52_P228389Hmg20aAK03922266867
11P0.6540.217P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0010128
(v1.0)		Hmg20a66867
010010