DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010239
GeneHpcal1
Synonymsneural visinin-like 3
Nvp3
VILIP3
visinin like 3
Vnsl3
Descriptionhippocalcin-like 1
LocusNM_016677 UCSC: chr12:17697620-17798732(+) OLP: chr12:17697620-17798732(+)
DB links


Entrez 53602
MGI 1855689
Ensembl ENSMUSG00000071379
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2010126 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010239
(v1.0)
Hpcal1NM_01667753602
68.543261.042317.48013.1327510.3725
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010239
(v1.0)
Hpcal1NM_01667753602
71.668218.930366.5984
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010239
(v1.0)
Hpcal1NM_01667753602
69.955360.429366.044
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010239
(v1.0)
Hpcal1NM_01667753602
71.709918.67172.4348
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010239
(v1.0)
Hpcal1NM_01667753602
16.18383.02484.60892
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010239
(v1.0)
Hpcal1NM_01667753602
16.79091.59928
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010239
(v1.0)
Hpcal1NM_01667753602
17.26258.62862
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010239
(v1.0)
1448812_atMm.485800Hpcal1NM_016677.453602
710.775740.775553.500
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0010239
(v1.0)
A_51_P487360Hpcal1NM_01667753602
11P0.5530.124P
0010239
(v1.0)
A_52_P536735Hpcal1NM_01667753602
11P0.8140.318P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0010239
(v1.0)
Hpcal153602
1221102