DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0010325

Gene

Hspa4

Synonyms

70kDa
APG-2
Hsp110
Hsp70RY

Description

heat shock protein 4

Locus

NM_008300 UCSC: chr11:53073316-53113981(-) OLP: chr11:53073316-53113981(-)

DB links

Entrez 15525
MGI 1342292
Ensembl ENSMUSG00000020361
Vega OTTMUSG00000000056

Feature

protein-coding

GO_BP

11 Terms

GO_MF

5 Terms

GO_CC

4 Terms

KEGG

1 Terms

see DBTMEE:2010212 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0010325 (v1.0)	Hspa4	NM_008300	15525	27.5721	4.21546	31.7268	65.1079	56.378

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0010325 (v1.0)	Hspa4	NM_008300	15525	28.8292	10.9655	4.59916

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0010325 (v1.0)	Hspa4	NM_008300	15525	28.1401	4.17313	3.88453

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0010325 (v1.0)	Hspa4	NM_008300	15525	28.8459	10.8153	4.26042

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0010325 (v1.0)	Hspa4	NM_008300	15525	29.374	62.8643	57.1758

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0010325 (v1.0)	Hspa4	NM_008300	15525	32.5102	45.9276

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0010325 (v1.0)	Hspa4	NM_008300	15525	0.684228	1.96

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0010325 (v1.0)	5014	G0119D07-3	Mm.1032	Hspa4	15525	U032758	NAP007141-001	Hspa4;	TC809241	Q61316	U,F,2	3.0416	3.1763	3.874	4.2249	3.4985	3.8485	3.734

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0010325 (v1.0)	1416146_at	Mm.239865	Hspa4	NM_008300.3	15525	782.7	92.775	485.15	752.3	1187.05
0010325 (v1.0)	1435194_at	Mm.239865	Hspa4	NM_008300.3	15525	0	0	0	94.625	284.775

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0010325 (v1.0)	A_51_P200477	Hspa4	AK220167	15525	1	1	P	0.563	0.111	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0010325 (v1.0)	Hspa4	15525	42	55	40	128	143	91