DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0010662

Gene

Ino80

Synonyms

INO80
Inoc1

Description

INO80 homolog (S. cerevisiae)

Locus

NM_026574 UCSC: chr2:119198779-119303365(-) OLP: chr2:119198779-119303365(-)

DB links

Entrez 68142
MGI 1915392
Ensembl ENSMUSG00000034154
Vega OTTMUSG00000015947

Feature

protein-coding

GO_BP

20 Terms

GO_MF

11 Terms

GO_CC

3 Terms

KEGG

see DBTMEE:2010559 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0010662 (v1.0)	Ino80	NM_026574	68142	11.5377	6.68246	19.3336	19.963	3.13531

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0010662 (v1.0)	Ino80	NM_026574	68142	12.0637	0.916016	7.29071

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0010662 (v1.0)	Ino80	NM_026574	68142	11.7753	6.61536	7.20625

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0010662 (v1.0)	Ino80	NM_026574	68142	12.0707	0.90347	7.90358

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0010662 (v1.0)	Ino80	NM_026574	68142	17.8999	19.275	19.0566

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0010662 (v1.0)	Ino80	NM_026574	68142	7.66257	11.4321

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0010662 (v1.0)	Ino80	NM_026574	68142	6.41	5.13398

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0010662 (v1.0)	11188	H3109F11-3	Mm.89148	4632409L19Rik	68142	U023227	NAP107147-1	2310079N15Rik;4632409L19Rik;	TC920625	Q9CU66	U,F,2	2.6545	2.7422	2.7591	2.7885	2.5886	2.6941	2.6471
0010662 (v1.0)	15688	K0226A01-3	Mm.89148	4632409L19Rik	68142	U023227	NAP119944-1	2310079N15Rik;4632409L19Rik;	TC920625	Q9CU66	U,F,2	4.0181	3.9747	4.149	4.1447	3.9404	3.9857	3.9533

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0010662 (v1.0)	1417317_s_at	Mm.19355~Mm.330496	Rpl35a~Ino80	NM_021338.3,NM_001130484.1,NM_001130485.1~NM_026574.3	57808 68142	1559.88	183.7	1228.53	7551.95	5354.15
0010662 (v1.0)	1418125_at	Mm.330496	Ino80	NM_026574.3	68142	143.55	126.775	216.2	214.7	100.625

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0010662 (v1.0)	A_51_P368705	4632409L19Rik	NM_026574	68142	1	1	P	1.234	0.287	P
0010662 (v1.0)	A_52_P354363	4632409L19Rik	NM_026574	68142	1	1	P	0.301	0.0552	P

N/A