DBTMEE:0011055
Gene | Kdm2b |
Synonyms | Cxxc2 Fbxl10 Jhdm1b |
Description | lysine (K)-specific demethylase 2B |
Locus | NM_013910 UCSC: chr5:123320685-123350359(-) OLP: chr5:123320685-123350359(-) NM_001005866 UCSC: chr5:123320685-123438542(-) OLP: chr5:123320685-123438542(-) NM_001003953 UCSC: chr5:123320685-123439101(-) OLP: chr5:123320685-123439101(-)
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DB links |

Entrez 30841 MGI 1354737 Ensembl ENSMUSG00000029475 Vega OTTMUSG00000026750
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Feature | protein-coding |
GO_BP |
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 19 Terms
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GO_MF |
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 10 Terms
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GO_CC |
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 1 Terms
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KEGG | |
Ver2_FPKM |
see DBTMEE:2010962 (v2.0)
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SPR_Histone_Erkek_5KaroundTSS |
N/A |
SPR_Histone_Erkek_2KaroundTSS |
N/A |
SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
SOLiD_OocyteTo4C_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
0011055 (v1.0) | Kdm2b | NM_001003953,NM_001005866,NM_013910 | 30841
| 168.57 | 125.847 | 29.2756 | 41.7706 | 4.79395 | |
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SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
0011055 (v1.0) | Kdm2b | NM_001003953,NM_001005866,NM_013910 | 30841
| 176.256 | 2.71772 | 137.302 |
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SOLiD_Partheno1C_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
0011055 (v1.0) | Kdm2b | NM_001003953,NM_001005866,NM_013910 | 30841
| 172.043 | 124.584 | 104.219 |
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SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
0011055 (v1.0) | Kdm2b | NM_001003953,NM_001005866,NM_013910 | 30841
| 176.358 | 2.6805 | 114.304 |
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SOLiD_Partheno4C_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
0011055 (v1.0) | Kdm2b | NM_001003953,NM_001005866,NM_013910 | 30841
| 27.1046 | 40.3312 | 22.7636 |
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Illumina_Oo_2C_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
0011055 (v1.0) | Kdm2b | NM_001003953,NM_001005866,NM_013910 | 30841
| 76.1688 | 36.0303 |
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SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
0011055 (v1.0) | Kdm2b | NM_001003953,NM_001005866,NM_013910 | 30841
| 12.8485 | 8.48567 |
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NIA60mer |
DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
0011055 (v1.0) | 10688 | H3102B12-3 | Mm.86406 | Fbxl10 | 30841
| | | | TC869589 | | U,F | 3.1701 | 3.2717 | 3.0353 | 3.2898 | 2.7532 | 2.9553 | 2.6751 |
0011055 (v1.0) | 21775 | L0910D07-3 | Mm.86406 | Fbxl10 | 30841
| U042688 | NAP034497-1 | | TC869591 | | | 3.4354 | 3.2018 | 3.487 | 3.3551 | 3.939 | 3.6649 | 3.8292 |
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MOE430 |
DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
0011055 (v1.0) | 1452198_at | Mm.86406 | Kdm2b | NM_001003953.1,NM_001005866.1,NM_013910.2 | 30841
| 1109.62 | 1900 | 601.15 | 880.775 | 319.5 |
0011055 (v1.0) | 1459861_s_at | Mm.86406 | Kdm2b | NM_001003953.1,NM_001005866.1,NM_013910.2 | 30841
| 8993.35 | 11521.9 | 4525.88 | 9380.75 | 3928.38 |
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Agilent44K |
DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
0011055 (v1.0) | A_51_P139597 | Fbxl10 | NM_001003953 | 30841
| 1 | 1 | P | 0.407 | 0.094 | P |
0011055 (v1.0) | A_51_P404953 | Fbxl10 | NM_001003953 | 30841
| 1 | 1 | P | 0.351 | 0.117 | P |
0011055 (v1.0) | A_52_P24648 | Fbxl10 | NM_001003953 | 30841
| 1 | 1 | P | 0.524 | 0.102 | P |
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Proteome |
DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
0011055 (v1.0) | Fbxl10 | 30841
| 10 | 10.67 | 9 | 11 | 12.67 | 10 |
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