DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0011294

Gene

Krr1

Synonyms

D10Ertd773e
Hrb2

Description

KRR1, small subunit (SSU) processome component, homolog (yeast)

Locus

NM_178610 UCSC: chr10:111409751-111425486(+) OLP: chr10:111409751-111425486(+)

DB links

Entrez 52705
MGI 1289274
Ensembl ENSMUSG00000063334
Vega OTTMUSG00000027781

Feature

protein-coding

GO_BP

2 Terms

GO_MF

1 Terms

GO_CC

3 Terms

KEGG

see DBTMEE:2011212 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0011294 (v1.0)	Krr1	NM_178610	52705	24.6719	17.3223	29.2116	36.3999	7.28915

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0011294 (v1.0)	Krr1	NM_178610	52705	25.7967	2.49142	18.899

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0011294 (v1.0)	Krr1	NM_178610	52705	25.1801	17.1484	11.0456

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0011294 (v1.0)	Krr1	NM_178610	52705	25.8117	2.4573	12.1144

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0011294 (v1.0)	Krr1	NM_178610	52705	27.0454	35.1456	32.2722

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0011294 (v1.0)	Krr1	NM_178610	52705	18.7957	25.2444

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0011294 (v1.0)	Krr1	NM_178610	52705	1.11533	1.56847

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0011294 (v1.0)	296	C0036E05-5	Mm.34606	D10Ertd773e	52705	U012010	NAP001784-001		TC799535,TC799534,TC799533		U,F,2	3.0346	3.0675	3.0392	2.9973	3.3047	3.0666	3.1319
0011294 (v1.0)	10244	H3093B10-3	Mm.34606	D10Ertd773e	52705	U012010	NAP001784-001		TC799534,TC799533		U,F,2	3.2095	3.2576	3.569	3.8442	3.3782	3.5348	3.2766

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0011294 (v1.0)	1428084_at	Mm.34606	Krr1	NM_178610.4	52705	347.3	111.3	467.125	688.35	481.65
0011294 (v1.0)	1420139_s_at	Mm.34606	Krr1	NM_178610.4	52705	1579.6	302.875	1895.78	4334.88	2988.48

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0011294 (v1.0)	A_52_P169507	Hrb2	NM_178610	52705	1	1	P	0.585	0.185	P

N/A