DBTMEE:0011639
| Gene | Lims1 |
| Synonyms | Lims1l
PINCH1 |
| Description | LIM and senescent cell antigen-like domains 1 |
| Locus | NM_026148 UCSC: chr10:57786214-57887439(+) OLP: chr10:57786214-57887439(+)
NM_201242 UCSC: chr10:57834202-57887439(+) OLP: chr10:57834202-57887439(+)
NM_001193303 UCSC: chr10:57857121-57887439(+) OLP: chr10:57857121-57887439(+)
|
| DB links |
Entrez 110829
MGI 1195263
Ensembl ENSMUSG00000019920
Vega OTTMUSG00000024823
|
| Feature | protein-coding |
| GO_BP |
-
 6 Terms
|
| GO_MF |
-
3 Terms
|
| GO_CC |
-
6 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2011579 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0011639
(v1.0) | Lims1 | NM_001193303,NM_026148,NM_201242 | 110829
| 4.38732 | 6.64205 | 8.62957 | 6.2721 | 12.1039 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0011639
(v1.0) | Lims1 | NM_001193303,NM_026148,NM_201242 | 110829
| 4.58734 | 3.12186 | 7.24663 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0011639
(v1.0) | Lims1 | NM_001193303,NM_026148,NM_201242 | 110829
| 4.4777 | 6.57536 | 5.02054 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0011639
(v1.0) | Lims1 | NM_001193303,NM_026148,NM_201242 | 110829
| 4.59001 | 3.0791 | 5.50636 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0011639
(v1.0) | Lims1 | NM_001193303,NM_026148,NM_201242 | 110829
| 7.98964 | 6.05596 | 4.89593 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0011639
(v1.0) | Lims1 | NM_001193303,NM_026148,NM_201242 | 110829
| 1.38502 | 17.5808 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0011639
(v1.0) | Lims1 | NM_001193303,NM_026148,NM_201242 | 110829
| 2.9446 | 3.92932 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0011639
(v1.0) | 20053 | L0518A11-3 | Mm.29097 | Lims1l | 110829
| U043076 | NAP101310-1 | Lims1l; | TC863585 | Q9D7B2 | U,F,2 | 3.5837 | 3.6456 | 3.5387 | 3.484 | 3.2682 | 3.5373 | 3.5894 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0011639
(v1.0) | 1418230_a_at | Mm.57734 | Lims1 | NM_001193303.1,NM_201242.1,NM_026148.3 | 110829
| 167.8 | 229.55 | 279.625 | 0 | 308.525 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0011639
(v1.0) | A_52_P222725 | Lims1 | NM_026148 | 110829
| 1 | 1 | P | 0.394 | 0.0729 | P |
|
| Proteome |
N/A |
