DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011686
GeneLmna
SynonymsDhe
lamin A/C
Descriptionlamin A
LocusNM_001002011 UCSC: chr3:88285071-88307254(-) OLP: chr3:88285071-88307254(-)
NM_019390 UCSC: chr3:88287128-88297221(-) OLP: chr3:88287128-88297221(-)
NM_001111102 UCSC: chr3:88287128-88307254(-) OLP: chr3:88287128-88307254(-)
DB links


Entrez 16905
MGI 96794
Ensembl ENSMUSG00000028063
Vega OTTMUSG00000030317
Featureprotein-coding
GO_BP
  •   11 Terms
      nucleus organization (GO:0006997)
      nuclear envelope organization (GO:0006998)
      muscle organ development (GO:0007517)
      establishment of cell polarity (GO:0030010)
      regulation of cell migration (GO:0030334)
      establishment or maintenance of microtubule cytoskeleton polarity (GO:0030951)
      protein localization to nucleus (GO:0034504)
      sterol regulatory element binding protein import into nucleus (GO:0035105)
      regulation of apoptotic process (GO:0042981)
      ventricular cardiac muscle cell development (GO:0055015)
      positive regulation of cell aging (GO:0090343)
GO_MF
GO_CC
KEGG
  •   3 Terms
      Hypertrophic cardiomyopathy (HCM) (mmu05410)
      Arrhythmogenic right ventricular cardiomyopathy (ARVC) (mmu05412)
      Dilated cardiomyopathy (mmu05414)
Ver2_FPKM see DBTMEE:2011630 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011686
(v1.0)		LmnaNM_001002011,NM_001111102,NM_01939016905
58.847646.707933.554117.7526166.505
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011686
(v1.0)		LmnaNM_001002011,NM_001111102,NM_01939016905
61.530635.570950.9593
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011686
(v1.0)		LmnaNM_001002011,NM_001111102,NM_01939016905
60.059946.238964.6266
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011686
(v1.0)		LmnaNM_001002011,NM_001111102,NM_01939016905
61.566335.083770.8802
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011686
(v1.0)		LmnaNM_001002011,NM_001111102,NM_01939016905
31.065817.140810.2352
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011686
(v1.0)		LmnaNM_001002011,NM_001111102,NM_01939016905
93.92537.19581
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011686
(v1.0)		LmnaNM_001002011,NM_001111102,NM_01939016905
2.777661.77775
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0011686
(v1.0)		1095C0177G03-3Mm.3438Lmna16905
U024254NAP001300-001Lmna;TC940143,TC940136,TC940135,TC940132,TC810679P11516U,F,23.21743.27323.62053.99372.9853.28713.4864
0011686
(v1.0)		16224K0344C06-3Mm.3438Lmna16905
U024254NAP001300-001Lmna;TC940132,TC810679P11516U,F,22.82872.89562.68112.76382.56512.73672.8158
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011686
(v1.0)		1421654_a_atMm.243014LmnaNM_001002011.2,NM_001111102.1,NM_019390.216905
132.75116.72596.52564.975235.5
0011686
(v1.0)		1425472_a_atMm.243014LmnaNM_001002011.2,NM_001111102.1,NM_019390.216905
00148.400
0011686
(v1.0)		1457670_s_atMm.243014LmnaNM_001002011.2,NM_001111102.1,NM_019390.216905
256.775257.4312.9250483.95
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0011686
(v1.0)		A_51_P313561LmnaNM_01939016905
11P0.4730.0966P
0011686
(v1.0)		A_51_P313566LmnaNM_01939016905
11P1.4680.162P
0011686
(v1.0)		A_52_P137765LmnaNM_01939016905
11P1.2790.247P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0011686
(v1.0)		Lmna16905
240250