DBTMEE:0011745
Gene | Lrch4 |
Synonyms | LRN LRRN4 SAP25 |
Description | leucine-rich repeats and calponin homology (CH) domain containing 4 |
Locus | NM_001168652 UCSC: chr5:138070351-138082327(+) OLP: chr5:138070351-138082327(+) NM_146164 UCSC: chr5:138070351-138082327(+) OLP: chr5:138070351-138082327(+)
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DB links |

Entrez 231798 MGI 1917193 Ensembl ENSMUSG00000029720 Ensembl ENSMUSG00000093445 Vega OTTMUSG00000040073 Vega OTTMUSG00000040080
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Feature | protein-coding |
GO_BP |
-
 1 Terms
negative regulation of transcription, DNA-dependent (GO:0045892)
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GO_MF |
-
 1 Terms
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GO_CC |
-
 2 Terms
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KEGG | |
Ver2_FPKM |
see DBTMEE:2011689 (v2.0)
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SPR_Histone_Erkek_5KaroundTSS |
N/A |
SPR_Histone_Erkek_2KaroundTSS |
N/A |
SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
SOLiD_OocyteTo4C_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
0011745 (v1.0) | Lrch4 | NM_001081962,NM_001168652,NM_146164 | 231798
| 47.3882 | 39.9845 | 10.3949 | 5.50347 | 5.6652 | |
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SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
0011745 (v1.0) | Lrch4 | NM_001081962,NM_001168652,NM_146164 | 231798
| 49.5487 | 15.4428 | 43.624 |
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SOLiD_Partheno1C_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
0011745 (v1.0) | Lrch4 | NM_001081962,NM_001168652,NM_146164 | 231798
| 48.3644 | 39.583 | 79.6827 |
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SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
0011745 (v1.0) | Lrch4 | NM_001081962,NM_001168652,NM_146164 | 231798
| 49.5775 | 15.2313 | 87.3933 |
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SOLiD_Partheno4C_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
0011745 (v1.0) | Lrch4 | NM_001081962,NM_001168652,NM_146164 | 231798
| 9.6241 | 5.31382 | 5.71045 |
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Illumina_Oo_2C_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
0011745 (v1.0) | Lrch4 | NM_001081962,NM_001168652,NM_146164 | 231798
| 46.8123 | 34.4581 |
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SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
0011745 (v1.0) | Lrch4 | NM_001168652,NM_146164 | 231798
| 16.7499 | 9.76978 |
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NIA60mer |
DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
0011745 (v1.0) | 2541 | C0335G07-3 | Mm.200763 | 2810008P14Rik | 231798
| | | 2810008P14Rik | TC921165,TC921164 | | | 3.1407 | 3.1605 | 3.0825 | 3.0621 | 2.6042 | 2.817 | 2.7179 |
0011745 (v1.0) | 21781 | L0910E09-3 | Mm.200763 | 2810008P14Rik | 231798
| U042702 | NAP096885-001 | 2810008P14Rik; | TC794326 | Q921G6 | | 2.9792 | 3.0668 | 2.7012 | 2.8488 | 2.6883 | 2.8258 | 2.6464 |
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MOE430 |
N/A |
Agilent44K |
DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
0011745 (v1.0) | A_52_P151278 | Lrch4 | NM_146164 | 231798
| 1 | 1 | P | 0.582 | 0.237 | P |
0011745 (v1.0) | A_52_P38964 | Lrch4 | AK131167 | 231798
| 1 | 1 | P | 2.206 | 0.0803 | P |
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Proteome |
DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
0011745 (v1.0) | Lrch4 | 231798
| 0 | 2 | 0 | 0 | 2 | 0 |
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