DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011807
GeneLrrc40
Synonyms
Descriptionleucine rich repeat containing 40
LocusNM_024194 UCSC: chr3:157699667-157731442(+) OLP: chr3:157699667-157731442(+)
DB links


Entrez 67144
MGI 1914394
Ensembl ENSMUSG00000063052
Vega OTTMUSG00000031933
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2011750 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011807
(v1.0)
Lrrc40NM_02419467144
47.431472.379632.646411.58810.3422
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011807
(v1.0)
Lrrc40NM_02419467144
49.59381.0784978.9678
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011807
(v1.0)
Lrrc40NM_02419467144
48.408571.652961.108
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011807
(v1.0)
Lrrc40NM_02419467144
49.62271.0637167.0212
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011807
(v1.0)
Lrrc40NM_02419467144
30.225511.188714.3971
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011807
(v1.0)
Lrrc40NM_02419467144
110.97828.0927
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011807
(v1.0)
Lrrc40NM_02419467144
29.879237.0699
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0011807
(v1.0)
4842G0109D01-3Mm.247372610040E16Rik67144
U004027NAP121755-0012610040E16Rik;TC858936Q9CRC8U,F,24.12284.27844.47574.10313.5273.9553.6414
0011807
(v1.0)
21537L0858F07-3Mm.247372610040E16Rik67144
U024797NAP121766-001TC849464U,F,22.94042.98423.16653.05492.70883.03042.7858
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011807
(v1.0)
1448720_atMm.358704Lrrc40NM_024194.567144
1054.62024.41815.03215.375435.5
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0011807
(v1.0)
A_51_P345139Lrrc40NM_02419467144
11P1.1160.469P
0011807
(v1.0)
A_52_P246081Lrrc40NM_02419467144
11P0.6750.161P
0011807
(v1.0)
A_52_P48446Lrrc40NM_02419467144
11P0.8350.325P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0011807
(v1.0)
Lrrc4067144
010010