DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0013936

Gene

Nhlrc2

Synonyms

Description

NHL repeat containing 2

Locus

NM_025811 UCSC: chr19:56622751-56673336(+) OLP: chr19:56622751-56673336(+)

DB links

Entrez 66866
MGI 1914116
Ensembl ENSMUSG00000025078

Feature

protein-coding

GO_BP

GO_MF

GO_CC

KEGG

see DBTMEE:2014389 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0013936 (v1.0)	Nhlrc2	NM_025811	66866	21.7756	14.2162	7.33129	4.61069	8.27578

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0013936 (v1.0)	Nhlrc2	NM_025811	66866	22.7683	1.45651	15.5102

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0013936 (v1.0)	Nhlrc2	NM_025811	66866	22.2242	14.0735	12.9273

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0013936 (v1.0)	Nhlrc2	NM_025811	66866	22.7816	1.43656	14.1782

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0013936 (v1.0)	Nhlrc2	NM_025811	66866	6.78764	4.45181	5.44707

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0013936 (v1.0)	Nhlrc2	NM_025811	66866	7.45532	1.71725

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0013936 (v1.0)	Nhlrc2	NM_025811	66866	4.4051	6.35546

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0013936 (v1.0)	1938	C0272A03-3	Mm.46346	1200003G01Rik	66866	U019598	NAP004464-001		TC820359	Q9CW64	U,F,2	3.3509	3.2083	2.6746	2.3827	2.3946	2.6003	2.8812
0013936 (v1.0)	22323	L0956H08-3	Mm.46346	1200003G01Rik	66866	U019598	NAP004464-001		TC820359	Q9CW64	U,F,2	3.008	3.1187	2.925	3.0346	2.7973	2.9606	2.844

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0013936 (v1.0)	1453048_at	Mm.392509	Nhlrc2		66866	787.7	639.65	0	455.675	740.075

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0013936 (v1.0)	A_51_P270184	Nhlrc2	NM_025811	66866	1	1	P	1.022	0.866	P
0013936 (v1.0)	A_52_P571661	Nhlrc2	NM_025811	66866	1	1	P	1.134	0.583	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0013936 (v1.0)	Nhlrc2	66866	3	4	3	4	6	6