DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014317
GeneNup50
SynonymsNpap60
Descriptionnucleoporin 50
LocusNM_016714 UCSC: chr15:84753858-84773393(+) OLP: chr15:84753858-84773393(+)
DB links


Entrez 18141
MGI 1351502
Ensembl ENSMUSG00000016619
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2014780 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014317
(v1.0)
Nup50NM_01671418141
25.053228.586912.8886.423825.71868
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014317
(v1.0)
Nup50NM_01671418141
26.19547.0922531.1889
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014317
(v1.0)
Nup50NM_01671418141
25.569328.299926.5679
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014317
(v1.0)
Nup50NM_01671418141
26.21066.9951129.1388
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014317
(v1.0)
Nup50NM_01671418141
11.93236.202458.4593
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014317
(v1.0)
Nup50NM_01671418141
43.373118.4222
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014317
(v1.0)
Nup50NM_01671418141
23.350817.9657
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014317
(v1.0)
18151L0065D07-3Mm.1794091700030K07Rik69508
U043466NAP098724-001Nup50;TC813965Q9D9R2U,F,23.72413.69543.22363.35783.22663.29263.2492
0014317
(v1.0)
19480L0275B12-3Mm.28379Npap6018141
U043466NAP012336-001Nup50;TC813965Q9D9R2U,F,23.33783.32423.42943.67843.71353.6623.6295
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014317
(v1.0)
1450722_atMm.28379Nup50NM_016714.218141
267.825218.775421.5275.1160.225
0014317
(v1.0)
1428328_atMm.28379Nup50NM_016714.218141
461.85491.375432.2250321.75
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0014317
(v1.0)
A_51_P122521Nup50NM_01671418141
11P0.5670.146P
0014317
(v1.0)
A_51_P411296Nup50NM_01671418141
11P0.1660.0486P
0014317
(v1.0)
A_51_P411297Nup50NM_01671418141
1 (0.937 to 1.112)1P0.434 (0.386 to 0.464)0.0000000773P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0014317
(v1.0)
Nup5018141
010010