DBTMEE:0014413
| Gene | Ogfod1 |
| Synonyms | |
| Description | 2-oxoglutarate and iron-dependent oxygenase domain containing 1 |
| Locus | NM_177767 UCSC: chr8:96561098-96591822(+) OLP: chr8:96561098-96591822(+)
NM_001093757 UCSC: chr8:96561098-96591822(+) OLP: chr8:96561098-96591822(+)
|
| DB links |
Entrez 270086
MGI 2442978
Ensembl ENSMUSG00000033009
Vega OTTMUSG00000023230
|
| Feature | protein-coding |
| GO_BP |
-
 1 Terms
|
| GO_MF |
-
7 Terms
iron ion binding (GO:0005506)
oxidoreductase activity (GO:0016491)
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (GO:0016702)
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705)
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706)
L-ascorbic acid binding (GO:0031418)
metal ion binding (GO:0046872)
|
| GO_CC |
-
2 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2014877 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0014413
(v1.0) | Ogfod1 | NM_001093757,NM_177767 | 270086
| 3.67872 | 4.46903 | 5.99521 | 7.87318 | 5.14173 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0014413
(v1.0) | Ogfod1 | NM_001093757,NM_177767 | 270086
| 3.84644 | 1.12071 | 4.87581 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0014413
(v1.0) | Ogfod1 | NM_001093757,NM_177767 | 270086
| 3.7545 | 4.42415 | 4.54814 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0014413
(v1.0) | Ogfod1 | NM_001093757,NM_177767 | 270086
| 3.84867 | 1.10536 | 4.98825 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0014413
(v1.0) | Ogfod1 | NM_001093757,NM_177767 | 270086
| 5.55063 | 7.60187 | 6.26217 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0014413
(v1.0) | Ogfod1 | NM_001093757,NM_177767 | 270086
| 2.51213 | 4.14289 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0014413
(v1.0) | Ogfod1 | NM_001093757,NM_177767 | 270086
| 0.0420514 | 0.274947 |
|
| NIA60mer |
N/A |
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0014413
(v1.0) | 1448096_at | Mm.251085 | Ogfod1 | NM_177767.4,NM_001093757.1 | 270086
| 0 | 55.1 | 63.025 | 0 | 112.2 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0014413
(v1.0) | A_52_P194481 | 4930415J21Rik | NM_177767 | 270086
| 1 | 1 | P | 1.024 | 0.903 | P |
0014413
(v1.0) | A_52_P259558 | 4930415J21Rik | NM_177767 | 270086
| 1 | 1 | P | 0.731 | 0.317 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0014413
(v1.0) | Ogfod1 | 270086
| 0 | 0 | 1 | 0 | 0 | 1 |
|
