DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0015701

Gene

Pa2g4

Synonyms

Ebp1
Plfap

Description

proliferation-associated 2G4

Locus

NM_011119 UCSC: chr10:127994822-128002990(-) OLP: chr10:127994822-128002990(-)

DB links

Entrez 18813
MGI 894684
Ensembl ENSMUSG00000025364
Vega OTTMUSG00000024830

Feature

protein-coding

GO_BP

6 Terms

GO_MF

5 Terms

GO_CC

4 Terms

KEGG

see DBTMEE:2016168 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0015701 (v1.0)	Pa2g4	NM_011119	18813	45.2277	30.0135	267.706	453.446	85.1185

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0015701 (v1.0)	Pa2g4	NM_011119	18813	47.2897	13.1379	32.7454

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0015701 (v1.0)	Pa2g4	NM_011119	18813	46.1594	29.7122	36.8819

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0015701 (v1.0)	Pa2g4	NM_011119	18813	47.3171	12.9579	40.4508

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0015701 (v1.0)	Pa2g4	NM_011119	18813	247.854	437.82	349.543

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0015701 (v1.0)	Pa2g4	NM_011119	18813	50.915	161.222

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0015701 (v1.0)	Pa2g4	NM_011119	18813	14.6513	22.0006

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0015701 (v1.0)	4744	G0101E08-3	Mm.4742	Pa2g4	18813	U032364	NAP096718-001	Pa2g4;	TC940519,TC940517	P50580	U,F,2	3.0511	3.12	3.7224	4.2121	3.7684	4.1554	3.8426
0015701 (v1.0)	16052	K0324D01-3	Mm.4742	Pa2g4	18813	U032364	NAP096718-001	Pa2g4;	TC940517	P50580	U,F,2	3.3866	3.4007	3.5236	3.5385	3.433	3.5052	3.4187

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0015701 (v1.0)	1450854_at	Mm.4742	Pa2g4	NM_011119.3	18813	33.3	38.45	51.5	85.975	61.075
0015701 (v1.0)	1435372_a_at	Mm.4742	Pa2g4	NM_011119.3	18813	127.75	0	318.55	587.55	328.975
0015701 (v1.0)	1420142_s_at	Mm.4742	Pa2g4	NM_011119.3	18813	111.825	97.125	287.325	506.625	370.6

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0015701 (v1.0)	A_51_P119923	Pa2g4	NM_011119	18813	1	1	P	0.437	0.0769	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0015701 (v1.0)	Pa2g4	18813	3	4	1	3	5	1