DBTMEE:0015716
| Gene | Pacsin2 |
| Synonyms | Syndapin II |
| Description | protein kinase C and casein kinase substrate in neurons 2 |
| Locus | NM_001159510 UCSC: chr15:83206037-83263280(-) OLP: chr15:83206037-83263280(-)
NM_001159509 UCSC: chr15:83206037-83295036(-) OLP: chr15:83206037-83295036(-)
NM_011862 UCSC: chr15:83206037-83263280(-) OLP: chr15:83206037-83263280(-)
|
| DB links |
Entrez 23970
MGI 1345153
Ensembl ENSMUSG00000016664
|
| Feature | protein-coding |
| GO_BP |
-
 4 Terms
|
| GO_MF |
-
3 Terms
|
| GO_CC |
-
4 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2016183 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0015716
(v1.0) | Pacsin2 | NM_001159509,NM_001159510,NM_011862 | 23970
| 145.448 | 122.047 | 70.2006 | 23.9068 | 17.7339 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0015716
(v1.0) | Pacsin2 | NM_001159509,NM_001159510,NM_011862 | 23970
| 152.08 | 9.17011 | 133.156 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0015716
(v1.0) | Pacsin2 | NM_001159509,NM_001159510,NM_011862 | 23970
| 148.445 | 120.821 | 109.953 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0015716
(v1.0) | Pacsin2 | NM_001159509,NM_001159510,NM_011862 | 23970
| 152.168 | 9.04451 | 120.592 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0015716
(v1.0) | Pacsin2 | NM_001159509,NM_001159510,NM_011862 | 23970
| 64.9948 | 23.083 | 25.0646 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0015716
(v1.0) | Pacsin2 | NM_001159509,NM_001159510,NM_011862 | 23970
| 78.6033 | 69.6799 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0015716
(v1.0) | Pacsin2 | NM_001159509,NM_001159510,NM_011862 | 23970
| 158.317 | 139.829 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0015716
(v1.0) | 12062 | H3131H02-3 | Mm.23978 | Pacsin2 | 23970
| U036475 | NAP097183-001 | Pacsin2; | TC921482,TC910091,TC871057 | Q03717 | U,F,2 | 5.0317 | 5.1018 | 4.0598 | 4.2328 | 3.305 | 3.6517 | 4.0971 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0015716
(v1.0) | 1417810_a_at | Mm.387390~Mm.23978 | Kcnb1~Pacsin2 | NM_008420.3~NM_011862.3,NM_001159509.1,NM_001159510.1 | 16500
23970
| 1978.35 | 3432.9 | 1567.4 | 202.375 | 880.725 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0015716
(v1.0) | A_51_P390884 | Pacsin2 | NM_011862 | 23970
| 1 | 1 | P | 1.489 | 0.157 | P |
0015716
(v1.0) | A_52_P229648 | Pacsin2 | NM_011862 | 23970
| 1 | 1 | P | 0.785 | 0.288 | P |
0015716
(v1.0) | A_52_P545393 | Pacsin2 | NM_011862 | 23970
| 1 | 1 | P | 0.834 | 0.323 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0015716
(v1.0) | Pacsin2 | 23970
| 7 | 11 | 10 | 9 | 13 | 21 |
|
