DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0015724
GenePafah1b1
SynonymsLIS-1
Lis1
lissencephaly-1 protein
Mdsh
PAF-AH 45
Pafaha
Descriptionplatelet-activating factor acetylhydrolase, isoform 1b, subunit 1
LocusNR_037610 UCSC: chr11:74487451-74537360(-) OLP: chr11:74487451-74537360(-)
NM_013625 UCSC: chr11:74487451-74537886(-) OLP: chr11:74487451-74537886(-)
DB links


Entrez 18472
MGI 109520
Ensembl ENSMUSG00000020745
Vega OTTMUSG00000006184
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2016191 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015724
(v1.0)		Pafah1b1NM_01362518472
59.380451.468427.812829.377543.152
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0015724
(v1.0)		Pafah1b1NM_01362518472
62.087720.549356.1531
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0015724
(v1.0)		Pafah1b1NM_01362518472
60.603750.951641.8056
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0015724
(v1.0)		Pafah1b1NM_01362518472
62.123720.267945.851
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0015724
(v1.0)		Pafah1b1NM_01362518472
25.750328.365226.087
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0015724
(v1.0)		Pafah1b1NM_01362518472
107.8918.324
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0015724
(v1.0)		Pafah1b1NM_01362518472
9.7518316.6909
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0015724
(v1.0)		8175H3061A06-3Mm.56337Pafah1b118472
U033069NAP097767-001Pafah1b1;TC842099P43035U,F,23.4313.36732.65793.0162.79852.82842.8505
0015724
(v1.0)		9085H3076C06-3Mm.182249Pafah1b118472
NAP035721-1TC9376602.2482.44062.54062.54452.31612.4372.4398
0015724
(v1.0)		12681H3149G01-3Mm.102814Pafah1b118472
U044102NAP049997-1TC8336192.99972.76752.73252.84832.87512.85492.9212
0015724
(v1.0)		17217K0542H12-3Mm.56337Pafah1b118472
U033069NAP097767-001Pafah1b1;P43035U,F,22.89532.83752.35711.80832.10162.15012.3169
0015724
(v1.0)		21966L0929D12-3Mm.56337Pafah1b118472
U033069NAP097767-001Pafah1b1;P43035U,F,23.34983.41682.81432.87662.98453.07413.1995
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0015724
(v1.0)		1448578_atMm.397111Pafah1b1NM_013625.418472
112.85210.87596.450111.375
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0015724
(v1.0)		A_51_P291388Pafah1b1NM_01362518472
11P1.2110.306P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0015724
(v1.0)		Pafah1b118472
111011151121