DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0015739

Gene

Pak4

Synonyms

Description

p21 protein (Cdc42/Rac)-activated kinase 4

Locus

NM_027470 UCSC: chr7:29343838-29383203(-) OLP: chr7:29343838-29383203(-)

DB links

Entrez 70584
MGI 1917834
Ensembl ENSMUSG00000030602
Vega OTTMUSG00000025040

Feature

protein-coding

GO_BP

4 Terms

GO_MF

7 Terms

GO_CC

1 Terms

KEGG

6 Terms

see DBTMEE:2016206 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0015739 (v1.0)	Pak4	NM_027470	70584	58.6141	73.6062	12.4489	12.1714	4.16504

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0015739 (v1.0)	Pak4	NM_027470	70584	61.2865	3.965	80.3059

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0015739 (v1.0)	Pak4	NM_027470	70584	59.8217	72.8671	125.004

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0015739 (v1.0)	Pak4	NM_027470	70584	61.3221	3.91069	137.1

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0015739 (v1.0)	Pak4	NM_027470	70584	11.5257	11.7519	10.2902

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0015739 (v1.0)	Pak4	NM_027470	70584	64.5523	10.823

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0015739 (v1.0)	Pak4	NM_027470	70584	52.7854	56.9768

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0015739 (v1.0)	2804	C0403G10-3		5730488L07Rik	70584			5730488L07Rik				3.9651	3.8153	3.7588	3.6257	3.9261	3.9328	3.9177
0015739 (v1.0)	18897	L0234C08-3	Mm.21876	5730488L07Rik	70584	U028328	NAP005934-001	5730488L07Rik;	TC920594,TC920593,TC894418	Q9CS71	U,F,2	4.4483	4.3161	3.7598	3.8909	3.6761	3.8488	3.8347

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0015739 (v1.0)	1428548_at	Mm.21876	Pak4	NM_027470.3	70584	779.3	951.15	890.075	0	0

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0015739 (v1.0)	A_51_P328760	Pak4	NM_027470	70584	1	1	P	1.079	0.584	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0015739 (v1.0)	Pak4	70584	1	0	0	3	0	0