DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0015811
GenePatl1
SynonymsPat1b
Descriptionprotein associated with topoisomerase II homolog 1 (yeast)
LocusNM_172635 UCSC: chr19:11986889-12019586(+) OLP: chr19:11986889-12019586(+)
DB links


Entrez 225929
MGI 2147679
Ensembl ENSMUSG00000046139
Featureprotein-coding
GO_BP
  •   3 Terms
      deadenylation-dependent decapping of nuclear-transcribed mRNA (GO:0000290)
      negative regulation of translation (GO:0017148)
      cytoplasmic mRNA processing body assembly (GO:0033962)
GO_MF
GO_CC
KEGG
  •   1 Terms
Ver2_FPKM see DBTMEE:2016279 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015811
(v1.0)
Patl1NM_172635225929
6.537129.699184.375685.370383.99086
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0015811
(v1.0)
Patl1NM_172635225929
6.835162.5597410.582
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0015811
(v1.0)
Patl1NM_172635225929
6.671799.6017911.709
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0015811
(v1.0)
Patl1NM_172635225929
6.839132.5246812.842
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0015811
(v1.0)
Patl1NM_172635225929
4.05125.185314.80136
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0015811
(v1.0)
Patl1NM_172635225929
20.97058.04221
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0015811
(v1.0)
Patl1NM_172635225929
7.529648.6171
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0015811
(v1.0)
16620K0436D07-3Mm.42711D430024J04225929
U019184NAP009183-001D430024J04;TC926786,TC926785U,F3.43343.32413.63193.50673.43613.49833.3608
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0015811
(v1.0)
1433697_atMm.42711Patl1NM_172635.3225929
658.425707.55591.375643.05822.8
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0015811
(v1.0)
A_51_P507280AV312086NM_172635225929
11P1.2510.269P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0015811
(v1.0)
Patl1225929
020030