DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016026
GenePdlim1
SynonymsmClim1
DescriptionPDZ and LIM domain 1 (elfin)
LocusNM_016861 UCSC: chr19:40296729-40346106(-) OLP: chr19:40296729-40346106(-)
DB links


Entrez 54132
MGI 1860611
Ensembl ENSMUSG00000055044
Featureprotein-coding
GO_BP
  •   1 Terms
      regulation of transcription, DNA-dependent (GO:0006355)
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2016499 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016026
(v1.0)		Pdlim1NM_01686154132
30.491347.56365.9674610.19888.6832
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016026
(v1.0)		Pdlim1NM_01686154132
31.881525.793551.8929
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016026
(v1.0)		Pdlim1NM_01686154132
31.119547.08673.936
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016026
(v1.0)		Pdlim1NM_01686154132
31.925.440281.0905
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016026
(v1.0)		Pdlim1NM_01686154132
5.524949.8473310.4627
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016026
(v1.0)		Pdlim1NM_01686154132
67.778231.7865
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016026
(v1.0)		Pdlim1NM_01686154132
102.48158.6009
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016026
(v1.0)		6063H3015E11-3Mm.5567Pdlim154132
U039018NAP096235-001Pdlim1;elfin;TC858332O70400U,F,23.06483.00422.35842.4942.54252.58412.5374
0016026
(v1.0)		10821H3104A10-3Mm.18086U039018NAP096235-001Pdlim1;elfin;TC858332O70400U,F,22.59332.42242.29382.2972.39942.35712.422
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016026
(v1.0)		1416554_atMm.5567Pdlim1NM_016861.454132
433.575901267.95536.95640.3
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0016026
(v1.0)		A_51_P461138Pdlim1NM_01686154132
11P1.2460.271P
0016026
(v1.0)		A_52_P283426Pdlim1AK07628554132
11P1.2560.287P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016026
(v1.0)		Pdlim154132
135145