DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0016136

Gene

Pgd

Synonyms

Description

phosphogluconate dehydrogenase

Locus

NM_001081274 UCSC: chr4:148524094-148540816(-) OLP: chr4:148524094-148540816(-)

DB links

Entrez 110208
MGI 97553
Ensembl ENSMUSG00000028961
Vega OTTMUSG00000010934

Feature

protein-coding

GO_BP

7 Terms

GO_MF

9 Terms

GO_CC

2 Terms

KEGG

3 Terms

see DBTMEE:2016612 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0016136 (v1.0)	Pgd	NM_001081274	110208	12.2859	11.6883	58.9915	77.9937	47.3965

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0016136 (v1.0)	Pgd	NM_001081274	110208	12.846	29.5028	12.7521

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0016136 (v1.0)	Pgd	NM_001081274	110208	12.539	11.5709	13.0588

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0016136 (v1.0)	Pgd	NM_001081274	110208	12.8535	29.0987	14.3225

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0016136 (v1.0)	Pgd	NM_001081274	110208	54.6169	75.3061	72.4635

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0016136 (v1.0)	Pgd	NM_001081274	110208	9.40487	12.5751

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0016136 (v1.0)	Pgd	NM_001081274	110208	9.84027	8.33748

N/A

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0016136 (v1.0)	1423706_a_at	Mm.252080	Pgd	NM_001081274.1	110208	56.375	65.825	238.325	445.55	582.95
0016136 (v1.0)	1436771_x_at	Mm.252080	Pgd	NM_001081274.1	110208	109.5	148.725	565.8	1435.38	1789.38
0016136 (v1.0)	1437380_x_at	Mm.252080	Pgd	NM_001081274.1	110208	100.1	123.35	454.375	1217.15	1723.97
0016136 (v1.0)	1438627_x_at	Mm.252080	Pgd	NM_001081274.1	110208	0	0	283.125	477.975	584.9

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0016136 (v1.0)	A_52_P84096	Pgd	BC011329	110208	1	1	P	0.633	0.138	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0016136 (v1.0)	Pgd	110208	10	10	7	13	17	10