DBTMEE:0016672
| Gene | Ppfibp1 |
| Synonyms | |
| Description | PTPRF interacting protein, binding protein 1 (liprin beta 1) |
| Locus | NM_001170433 UCSC: chr6:146837016-146980545(+) OLP: chr6:146837016-146980545(+)
NM_026221 UCSC: chr6:146837016-146980545(+) OLP: chr6:146837016-146980545(+)
|
| DB links |
Entrez 67533
MGI 1914783
Ensembl ENSMUSG00000016487
Vega OTTMUSG00000022991
|
| Feature | protein-coding |
| GO_BP | |
| GO_MF | |
| GO_CC | |
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2017162 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0016672
(v1.0) | Ppfibp1 | NM_001170433,NM_026221 | 67533
| 10.2352 | 15.0929 | 15.8536 | 6.324 | 23.1786 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0016672
(v1.0) | Ppfibp1 | NM_001170433,NM_026221 | 67533
| 10.7019 | 2.90897 | 16.4667 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0016672
(v1.0) | Ppfibp1 | NM_001170433,NM_026221 | 67533
| 10.4461 | 14.9413 | 13.0692 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0016672
(v1.0) | Ppfibp1 | NM_001170433,NM_026221 | 67533
| 10.7081 | 2.86913 | 14.3339 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0016672
(v1.0) | Ppfibp1 | NM_001170433,NM_026221 | 67533
| 14.678 | 6.10608 | 7.78156 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0016672
(v1.0) | Ppfibp1 | NM_001170433,NM_026221 | 67533
| 5.60905 | 5.25706 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0016672
(v1.0) | Ppfibp1 | NM_001170433,NM_026221 | 67533
| 3.56556 | 6.03152 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0016672
(v1.0) | 18120 | L0062H05-3 | Mm.161335 | | | U007583 | NAP037769-1 | Ppfibp1; | TC872374 | Q9CUT7 | U,F | 2.414 | 2.3661 | 2.5243 | 2.3456 | 2.5507 | 2.3677 | 2.5032 |
0016672
(v1.0) | 18349 | L0202C07-3 | Mm.103382 | Ppfibp1 | 67533
| U007583 | NAP002097-001 | Ppfibp1; | TC847883,TC847882 | Q9CUT7 | U,F | 3.695 | 3.6489 | 3.049 | 3.208 | 2.6624 | 2.7514 | 3.0945 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0016672
(v1.0) | 1452759_s_at | Mm.103382 | Ppfibp1 | NM_001170433.1,NM_026221.2 | 67533
| 139.225 | 279.45 | 359.35 | 158.625 | 202.875 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0016672
(v1.0) | A_51_P204860 | Ppfibp1 | NM_026221 | 67533
| 1 | 1 | P | 0.832 | 0.316 | P |
0016672
(v1.0) | A_51_P204862 | Ppfibp1 | NM_026221 | 67533
| 1 | 1 | P | 0.68 | 0.163 | P |
|
| Proteome |
N/A |
