DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0016707

Gene

Ppp1cb

Synonyms

Description

protein phosphatase 1, catalytic subunit, beta isoform

Locus

NM_172707 UCSC: chr5:32761343-32796085(+) OLP: chr5:32761343-32796085(+)

DB links

Entrez 19046
MGI 104871
Ensembl ENSMUSG00000014956
Vega OTTMUSG00000024328

Feature

protein-coding

GO_BP

8 Terms

GO_MF

7 Terms

GO_CC

6 Terms

KEGG

6 Terms

see DBTMEE:2017197 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0016707 (v1.0)	Ppp1cb	NM_172707	19046	20.6916	35.1452	36.8598	21.8642	66.866

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0016707 (v1.0)	Ppp1cb	NM_172707	19046	21.635	8.40916	38.3441

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0016707 (v1.0)	Ppp1cb	NM_172707	19046	21.1179	34.7923	22.9443

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0016707 (v1.0)	Ppp1cb	NM_172707	19046	21.6475	8.29399	25.1646

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0016707 (v1.0)	Ppp1cb	NM_172707	19046	34.1264	21.1108	18.7095

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0016707 (v1.0)	Ppp1cb	NM_172707	19046	36.2987	40.1835

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0016707 (v1.0)	Ppp1cb	NM_172707	19046	7.67121	30.3787

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0016707 (v1.0)	11645	H3121A04-3	Mm.4572	Ppp1cb	19046	U005461	NAP004095-001	Ppp1cb;	TC829970,TC829964	P37140	U,F,2	4.1788	4.1757	3.2779	3.3515	3.6702	3.8758	4.3577
0016707 (v1.0)	21722	L0906E08-3		Ppp1cb	19046	U005461	NAP004095-001	Ppp1cb;	TC829970	P37140	U,F,2	2.8364	2.7822	2.6934	2.5678	2.5792	2.547	2.4394

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0016707 (v1.0)	1426205_at	Mm.241931	Ppp1cb	NM_172707.3	19046	209.7	342.8	360.325	265.175	693.85
0016707 (v1.0)	1431328_at	Mm.241931	Ppp1cb	NM_172707.3	19046	91.4	204.225	120.175	143.025	125
0016707 (v1.0)	1433540_x_at	Mm.241931	Ppp1cb	NM_172707.3	19046	258.25	488.175	568.5	468.9	770.25
0016707 (v1.0)	1456462_x_at	Mm.241931	Ppp1cb	NM_172707.3	19046	108.85	143.775	150.925	138.475	213.925

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0016707 (v1.0)	A_51_P342716	Ppp1cb	NM_172707	19046	1	1	P	0.581	0.116	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0016707 (v1.0)	Ppp1cb	19046	6	0	4	7	0	4