DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0016711

Gene

Ppp1r12a

Synonyms

D10Ertd625e
Mypt1

Description

protein phosphatase 1, regulatory (inhibitor) subunit 12A

Locus

NM_027892 UCSC: chr10:107599456-107714631(+) OLP: chr10:107599456-107714631(+)

DB links

Entrez 17931
MGI 1309528
Ensembl ENSMUSG00000019907

Feature

protein-coding

GO_BP

8 Terms

GO_MF

6 Terms

GO_CC

5 Terms

KEGG

4 Terms

see DBTMEE:2017201 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0016711 (v1.0)	Ppp1r12a	NM_027892	17931	96.3577	137.084	83.9716	31.3592	13.4275

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0016711 (v1.0)	Ppp1r12a	NM_027892	17931	100.751	4.80958	149.561

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0016711 (v1.0)	Ppp1r12a	NM_027892	17931	98.3428	135.707	139.313

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0016711 (v1.0)	Ppp1r12a	NM_027892	17931	100.809	4.7437	152.793

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0016711 (v1.0)	Ppp1r12a	NM_027892	17931	77.7447	30.2786	33.3399

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0016711 (v1.0)	Ppp1r12a	NM_027892	17931	125.485	63.5784

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0016711 (v1.0)	Ppp1r12a	NM_027892	17931	43.868	52.1897

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0016711 (v1.0)	9732	H3085F05-3	Mm.133122	Ppp1r12a	17931							4.4403	4.4533	3.6863	3.3761	3.3454	3.3737	3.5004
0016711 (v1.0)	21177	L0838B07-3	Mm.133122	Ppp1r12a	17931	U011986	NAP001490-001	Mypt1;Ppp1r12a;	TC836492,TC836491,TC836490	Q9DBR7	U,F,2	4.7057	4.7056	3.9505	4.1538	3.4713	3.9234	3.9408

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0016711 (v1.0)	1429487_at	Mm.422959	Ppp1r12a	NM_027892.2	17931	2949.4	5023.45	3667.68	1235.6	1808.22
0016711 (v1.0)	1437734_at	Mm.422959	Ppp1r12a	NM_027892.2	17931	523.75	1050.78	1098.82	238.175	371.725

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0016711 (v1.0)	A_51_P237002	Ppp1r12a	XM_137239	17931	1	1	P	0.547	0.104	P
0016711 (v1.0)	A_52_P437363	Ppp1r12a	AK004785	17931	1	1	P	0.864	0.476	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0016711 (v1.0)	Ppp1r12a	17931	1	2	0	1	2	0