DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0017122

Gene

Psmf1

Synonyms

PI31

Description

proteasome (prosome, macropain) inhibitor subunit 1

Locus

NM_212446 UCSC: chr2:151541798-151567029(-) OLP: chr2:151541798-151567029(-)

DB links

Entrez 228769
MGI 1346072
Ensembl ENSMUSG00000032869
Vega OTTMUSG00000015817

Feature

protein-coding

GO_BP

GO_MF

GO_CC

2 Terms

KEGG

1 Terms

see DBTMEE:2017624 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0017122 (v1.0)	Psmf1	NM_212446	228769	84.4717	28.01	5.17935	8.38404	4.23886

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0017122 (v1.0)	Psmf1	NM_212446	228769	88.3229	10.9009	30.5595

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0017122 (v1.0)	Psmf1	NM_212446	228769	86.2119	27.7288	35.0725

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0017122 (v1.0)	Psmf1	NM_212446	228769	88.3742	10.7516	38.4663

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0017122 (v1.0)	Psmf1	NM_212446	228769	4.79527	8.09513	7.53937

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0017122 (v1.0)	Psmf1	NM_212446	228769	16.687	3.59255

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0017122 (v1.0)	Psmf1	NM_212446	228769	8.12	2.73382

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0017122 (v1.0)	2986	C0459F05-3	Mm.146984	MGC18784	228769	U023493	NAP093842-001	MGC18784;	TC930651,TC930647,TC930645	Q91X47	U,F	3.4839	3.4276	2.9942	3.216	3.9485	3.7073	3.7935

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0017122 (v1.0)	1451337_at	Mm.146984	Psmf1	NM_212446.1	228769	881.6	348.025	0	0	0

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0017122 (v1.0)	A_51_P274593	Psmf1	NM_212446	228769	1	1	P	0.34	0.0766	P
0017122 (v1.0)	A_52_P271555	Psmf1	NM_212446	228769	1	1	P	0.475	0.0891	P
0017122 (v1.0)	A_52_P66313	Psmf1	NM_144889	228769	1	1	P	0.385	0.121	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0017122 (v1.0)	Psmf1	228769	5	3	6	10	13.5	14