DBTMEE:0017137
| Gene | Ptbp1 |
| Synonyms | hnRNP I
Ptb |
| Description | polypyrimidine tract binding protein 1 |
| Locus | NM_008956 UCSC: chr10:79317350-79327178(+) OLP: chr10:79317350-79327178(+)
NM_001077363 UCSC: chr10:79317350-79327178(+) OLP: chr10:79317350-79327178(+)
|
| DB links |
Entrez 19205
MGI 97791
Ensembl ENSMUSG00000006498
Vega OTTMUSG00000035444
|
| Feature | protein-coding |
| GO_BP |
-
 4 Terms
regulation of alternative mRNA splicing, via spliceosome (GO:0000381)
negative regulation of RNA splicing (GO:0033119)
negative regulation of mRNA splicing, via spliceosome (GO:0048025)
negative regulation of muscle cell differentiation (GO:0051148)
|
| GO_MF |
-
2 Terms
|
| GO_CC |
-
1 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2017639 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0017137
(v1.0) | Ptbp1 | NM_001077363,NM_008956 | 19205
| 81.8959 | 125.189 | 139.016 | 106.535 | 90.5136 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0017137
(v1.0) | Ptbp1 | NM_001077363,NM_008956 | 19205
| 85.6297 | 27.1746 | 136.584 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0017137
(v1.0) | Ptbp1 | NM_001077363,NM_008956 | 19205
| 83.5831 | 123.932 | 214.289 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0017137
(v1.0) | Ptbp1 | NM_001077363,NM_008956 | 19205
| 85.6795 | 26.8024 | 235.025 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0017137
(v1.0) | Ptbp1 | NM_001077363,NM_008956 | 19205
| 128.708 | 102.863 | 109.639 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0017137
(v1.0) | Ptbp1 | NM_001077363,NM_008956 | 19205
| 49.9989 | 84.2433 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0017137
(v1.0) | Ptbp1 | NM_001077363,NM_008956 | 19205
| 122.061 | 66.1206 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0017137
(v1.0) | 5848 | H3010A04-3 | Mm.19117 | Ptbp1 | 19205
| U011726 | NAP031326-1 | Ptbp1; | TC908500 | P17225 | U,F,2 | 3.2559 | 3.3235 | 2.7009 | 3.0445 | 3.1784 | 3.2028 | 3.2074 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0017137
(v1.0) | 1424874_a_at | Mm.265610 | Ptbp1 | NM_001077363.1,NM_008956.2 | 19205
| 0 | 300.5 | 429.025 | 340.25 | 247.65 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0017137
(v1.0) | A_51_P462692 | Ptbp1 | NM_008956 | 19205
| 1 | 1 | P | 1.226 | 0.29 | P |
0017137
(v1.0) | A_52_P234619 | Ptbp1 | NM_008956 | 19205
| 1 | 1 | P | 0.422 | 0.1 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0017137
(v1.0) | Ptbp1 | 19205
| 0 | 1 | 0 | 0 | 1 | 0 |
|
