DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0017151

Gene

Pten

Synonyms

MMAC1
TEP1

Description

phosphatase and tensin homolog

Locus

NM_008960 UCSC: chr19:32832067-32900650(+) OLP: chr19:32832067-32900650(+)

DB links

Entrez 19211
MGI 109583
Ensembl ENSMUSG00000013663
Vega OTTMUSG00000021203

Feature

protein-coding

GO_BP

75 Terms

GO_MF

17 Terms

GO_CC

12 Terms

KEGG

11 Terms

see DBTMEE:2017654 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0017151 (v1.0)	Pten	NM_008960	19211	8.32401	11.7248	52.9561	39.7609	54.8913

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0017151 (v1.0)	Pten	NM_008960	19211	8.70352	4.90019	12.792

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0017151 (v1.0)	Pten	NM_008960	19211	8.4955	11.6071	10.5591

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0017151 (v1.0)	Pten	NM_008960	19211	8.70858	4.83307	11.5809

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0017151 (v1.0)	Pten	NM_008960	19211	49.0291	38.3907	35.2303

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0017151 (v1.0)	Pten	NM_008960	19211	4.89386	28.482

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0017151 (v1.0)	Pten	NM_008960	19211	2.09152	2.22578

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0017151 (v1.0)	9759	H3086A07-3	Mm.1591	Pten	19211	U019374	NAP120660-001	Pten;	TC898006	O08586	U,F,2	3.1484	3.2142	3.4424	3.735	3.1258	3.2591	3.1445
0017151 (v1.0)	20071	L0518H05-3	Mm.1591	Pten	19211							3.1083	3.091	3.3303	3.6871	2.9998	3.1475	3.025
0017151 (v1.0)	20271	L0534D06-3	Mm.1591	Pten	19211							3.9739	4.265	4.7266	4.4904	4.0105	4.3187	4.0593
0017151 (v1.0)	21610	L0863G12-3	Mm.1591	Pten	19211	U019374	NAP120660-001	Pten;	TC898006	O08586	U,F,2	2.4729	2.5592	2.3062	2.3524	2.2445	2.3491	2.1903

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0017151 (v1.0)	1422553_at	Mm.245395	Pten	NM_008960.2	19211	168	326.425	1098.05	667.8	261.225
0017151 (v1.0)	1454722_at	Mm.245395	Pten	NM_008960.2	19211	128.275	163.775	226	391.375	273.6
0017151 (v1.0)	1455728_at	Mm.245395	Pten	NM_008960.2	19211	0	0	0	528	328.6

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0017151 (v1.0)	A_51_P275350	Pten	NM_008960	19211	1	1	P	0.426	0.0944	P

N/A