DBTMEE:0017195
| Gene | Ptpn11 |
| Synonyms | PTP1D
PTP2C
SH-PTP2
SH2 domain-containing protein tyrosine phosphatase-2
SHP-2
Shp2
Syp |
| Description | protein tyrosine phosphatase, non-receptor type 11 |
| Locus | NM_011202 UCSC: chr5:121580542-121641406(-) OLP: chr5:121580542-121641406(-)
NM_001109992 UCSC: chr5:121580542-121641406(-) OLP: chr5:121580542-121641406(-)
|
| DB links |
Entrez 19247
MGI 99511
Ensembl ENSMUSG00000043733
Vega OTTMUSG00000016267
|
| Feature | protein-coding |
| GO_BP |
-
 25 Terms
|
| GO_MF |
-
13 Terms
|
| GO_CC |
-
7 Terms
|
| KEGG |
-
7 Terms
Jak-STAT signaling pathway (mmu04630)
Natural killer cell mediated cytotoxicity (mmu04650)
Leukocyte transendothelial migration (mmu04670)
Neurotrophin signaling pathway (mmu04722)
Adipocytokine signaling pathway (mmu04920)
Renal cell carcinoma (mmu05211)
Chronic myeloid leukemia (mmu05220)
|
| Ver2_FPKM |
see DBTMEE:2017701 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0017195
(v1.0) | Ptpn11 | NM_001109992,NM_011202 | 19247
| 55.514 | 94.6839 | 70.8389 | 36.164 | 26.2259 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0017195
(v1.0) | Ptpn11 | NM_001109992,NM_011202 | 19247
| 58.045 | 10.3078 | 103.302 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0017195
(v1.0) | Ptpn11 | NM_001109992,NM_011202 | 19247
| 56.6576 | 93.7332 | 109.108 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0017195
(v1.0) | Ptpn11 | NM_001109992,NM_011202 | 19247
| 58.0787 | 10.1666 | 119.666 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0017195
(v1.0) | Ptpn11 | NM_001109992,NM_011202 | 19247
| 65.5858 | 34.9178 | 42.7514 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0017195
(v1.0) | Ptpn11 | NM_001109992,NM_011202 | 19247
| 52.3123 | 35.3975 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0017195
(v1.0) | Ptpn11 | NM_001109992,NM_011202 | 19247
| 26.5216 | 22.3435 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0017195
(v1.0) | 10730 | H3102G07-3 | Mm.220855 | Ptpn11 | 19247
| U026679 | NAP007805-001 | Ptpn11; | TC859916,TC859915 | P35235 | U,F,2 | 3.5275 | 3.5112 | 3.3144 | 3.6668 | 3.4585 | 3.3835 | 3.4148 |
0017195
(v1.0) | 14127 | J0412C05-3 | Mm.8681 | AW536184 | 100974
| U026679 | NAP019588-001 | Ptpn11; | TC815100 | P35235 | U,F,2 | 3.7801 | 3.9732 | 4.0583 | 3.8822 | 3.608 | 3.7411 | 3.5892 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0017195
(v1.0) | 1451225_at | Mm.8681 | Ptpn11 | NM_011202.3,NM_001109992.1 | 19247
| 940.6 | 1335.45 | 1252.65 | 298.125 | 474.325 |
0017195
(v1.0) | 1427699_a_at | Mm.8681 | Ptpn11 | NM_011202.3,NM_001109992.1 | 19247
| 0 | 0 | 171.65 | 0 | 0 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0017195
(v1.0) | A_51_P173622 | Ptpn11 | NM_011202 | 19247
| 1 | 1 | P | 0.901 | 0.487 | P |
0017195
(v1.0) | A_52_P641185 | Ptpn11 | NM_011202 | 19247
| 1 | 1 | P | 1.107 | 0.495 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0017195
(v1.0) | Ptpn11 | 19247
| 5 | 9 | 2.5 | 7 | 13 | 2.5 |
|
