DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0017200

Gene

Ptpn2

Synonyms

Ptpt
TC-PTP

Description

protein tyrosine phosphatase, non-receptor type 2

Locus

NM_008977 UCSC: chr18:67825155-67884275(-) OLP: chr18:67825155-67884275(-)
NM_001127177 UCSC: chr18:67825155-67884275(-) OLP: chr18:67825155-67884275(-)

DB links

Entrez 19255
MGI 97806
Ensembl ENSMUSG00000024539
Vega OTTMUSG00000029831

Feature

protein-coding

GO_BP

3 Terms

GO_MF

5 Terms

GO_CC

3 Terms

KEGG

see DBTMEE:2017706 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0017200 (v1.0)	Ptpn2	NM_001127177,NM_008977	19255	52.2444	36.5689	95.0521	80.0322	13.0288

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0017200 (v1.0)	Ptpn2	NM_001127177,NM_008977	19255	54.6263	2.38064	39.8975

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0017200 (v1.0)	Ptpn2	NM_001127177,NM_008977	19255	53.3207	36.2017	34.3118

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0017200 (v1.0)	Ptpn2	NM_001127177,NM_008977	19255	54.6581	2.34803	37.632

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0017200 (v1.0)	Ptpn2	NM_001127177,NM_008977	19255	88.0035	77.2743	75.4772

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0017200 (v1.0)	Ptpn2	NM_001127177,NM_008977	19255	73.6051	184.004

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0017200 (v1.0)	Ptpn2	NM_001127177,NM_008977	19255	70.1153	56.105

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0017200 (v1.0)	12702	H3150B11-5		Ptpn2	19255	U038523	NAP016461-001	Ptpn2;	TC926014,TC859933	Q06180	U,F,2	2.5277	2.3711	2.4691	2.5884	2.1944	2.2535	2.0083
0017200 (v1.0)	12986	H3156C04-3	Mm.985	Ptpn2	19255	U038523	NAP017755-001	Ptpn2;	TC859933	Q06180	U,F,2	2.5934	2.5835	2.7709	3.0831	2.6372	2.6974	2.4993
0017200 (v1.0)	19448	L0274A03-3	Mm.985	Ptpn2	19255	U038523	NAP016461-001	Ptpn2;	TC926016,TC926014	Q06180	U,F,2	4.1182	4.0774	4.0142	4.2911	3.8812	3.8027	3.4044

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0017200 (v1.0)	1417140_a_at	Mm.260433	Ptpn2	NM_001127177.1,NM_008977.3	19255	2018.57	963.425	2381.32	2283.9	427.85
0017200 (v1.0)	1425197_at	Mm.260433	Ptpn2	NM_001127177.1,NM_008977.3	19255	134.65	206.75	735.025	497.15	103.85
0017200 (v1.0)	1438562_a_at	Mm.260433	Ptpn2	NM_001127177.1,NM_008977.3	19255	3620.68	1796.22	4068.88	4366.33	874.75

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0017200 (v1.0)	A_51_P211732	Ptpn2	NM_008977	19255	1	1	P	0.706	0.178	P
0017200 (v1.0)	A_52_P403484	Ptpn2	BC008269	19255	1	1	P	0.479	0.0886	P

N/A