DBTMEE:0017242
| Gene | Puf60 |
| Synonyms | |
| Description | poly-U binding splicing factor 60 |
| Locus | NM_001164600 UCSC: chr15:75900612-75911300(-) OLP: chr15:75900612-75911300(-)
NM_133691 UCSC: chr15:75900612-75911376(-) OLP: chr15:75900612-75911376(-)
NM_028364 UCSC: chr15:75900612-75911376(-) OLP: chr15:75900612-75911376(-)
|
| DB links |
Entrez 67959
MGI 1915209
Ensembl ENSMUSG00000002524
|
| Feature | protein-coding |
| GO_BP |
-
 5 Terms
|
| GO_MF |
-
4 Terms
|
| GO_CC |
-
2 Terms
|
| KEGG |
-
1 Terms
|
| Ver2_FPKM |
see DBTMEE:2017749 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0017242
(v1.0) | Puf60 | NM_001164600,NM_028364,NM_133691 | 67959
| 96.7424 | 9.15398 | 83.2585 | 100.022 | 95.3869 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0017242
(v1.0) | Puf60 | NM_001164600,NM_028364,NM_133691 | 67959
| 101.153 | 20.1585 | 9.98719 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0017242
(v1.0) | Puf60 | NM_001164600,NM_028364,NM_133691 | 67959
| 98.7354 | 9.06206 | 12.9997 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0017242
(v1.0) | Puf60 | NM_001164600,NM_028364,NM_133691 | 67959
| 101.212 | 19.8823 | 14.2577 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0017242
(v1.0) | Puf60 | NM_001164600,NM_028364,NM_133691 | 67959
| 77.0844 | 96.5751 | 94.2018 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0017242
(v1.0) | Puf60 | NM_001164600,NM_028364,NM_133691 | 67959
| 30.7169 | 48.796 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0017242
(v1.0) | Puf60 | NM_001164600,NM_028364,NM_133691 | 67959
| 1.02735 | 1.42461 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0017242
(v1.0) | 5602 | H3003G02-3 | Mm.29965 | 2410104I19Rik | 67959
| U036325 | NAP097411-001 | 2410104I19Rik; | TC798760 | Q91VR6 | U,F,2 | 2.691 | 2.958 | 3.0991 | 3.2831 | 2.6931 | 2.9913 | 2.7348 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0017242
(v1.0) | 1416438_at | Mm.29965 | Puf60 | NM_028364.2,NM_133691.5,NM_001164600.1 | 67959
| 492.475 | 0 | 177.25 | 246.2 | 223.825 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0017242
(v1.0) | A_51_P177583 | 2410104I19Rik | NM_133691 | 67959
| 1 | 1 | P | 0.532 | 0.118 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0017242
(v1.0) | Puf60 | 67959
| 4.67 | 4 | 0 | 7.33 | 8 | 0 |
|
