DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0017442

Gene

Ran

Synonyms

Description

RAN, member RAS oncogene family

Locus

NM_009391 UCSC: chr5:129526031-129530196(+) OLP: chr5:129526031-129530196(+)

DB links

Entrez 19384
MGI 1333112
Ensembl ENSMUSG00000029430
Vega OTTMUSG00000016923

Feature

protein-coding

GO_BP

16 Terms

GO_MF

6 Terms

GO_CC

3 Terms

KEGG

2 Terms

see DBTMEE:2017955 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0017442 (v1.0)	Ran	NM_009391	19384	7.75756	10.7922	68.4944	101.864	130.222

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0017442 (v1.0)	Ran	NM_009391	19384	8.11124	31.4309	11.7745

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0017442 (v1.0)	Ran	NM_009391	19384	7.91738	10.6838	11.1543

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0017442 (v1.0)	Ran	NM_009391	19384	8.11596	31.0004	12.2337

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0017442 (v1.0)	Ran	NM_009391	19384	63.4151	98.3538	86.737

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0017442 (v1.0)	Ran	NM_009391	19384	8.79245	103.695

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0017442 (v1.0)	Ran	NM_009391	19384	26.2555	24.7371

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0017442 (v1.0)	16280	K0401F12-3				U006225	NAP092528-001	Ran;	TC813573	P17080	U,F,2	2.6615	2.7144	2.7746	3.2671	3.2005	3.3191	3.2313
0017442 (v1.0)	19615	L0286A06-3	Mm.7521	Ran	19384	U006225	NAP056554-1	Ran;	TC813578,TC813573,TC813571	P17080	U,F,2	4.1794	4.2902	4.5222	5.1906	5.0762	5.2672	5.06

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0017442 (v1.0)	1433569_x_at	Mm.297440	Ran	NM_009391.3	19384	1237.1	1542.65	3249.12	8319.53	6350.95
0017442 (v1.0)	1460551_at	Mm.297440	Ran	NM_009391.3	19384	41.3	0	34.05	244.425	407.3
0017442 (v1.0)	1434578_x_at	Mm.297440	Ran	NM_009391.3	19384	606.75	566.825	2117.95	3456.43	2289.95
0017442 (v1.0)	1438977_x_at	Mm.297440	Ran	NM_009391.3	19384	436.75	463.275	1633.12	3611.45	2618.07
0017442 (v1.0)	1439270_x_at	Mm.297440	Ran	NM_009391.3	19384	1486.78	1717.43	3281.6	5616.48	3410.57

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0017442 (v1.0)	A_52_P344910	Ran	NM_009391	19384	1	1	P	0.793	0.258	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0017442 (v1.0)	Ran	19384	6	10	15	17	25	59