DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0017446

Gene

Ranbp2

Synonyms

Description

RAN binding protein 2

Locus

NM_011240 UCSC: chr10:57909600-57956902(+) OLP: chr10:57909600-57956902(+)

DB links

Entrez 19386
MGI 894323
Ensembl ENSMUSG00000003226

Feature

protein-coding

GO_BP

6 Terms

GO_MF

6 Terms

GO_CC

3 Terms

KEGG

1 Terms

see DBTMEE:2017959 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0017446 (v1.0)	Ranbp2	NM_011240	19386	6.25634	3.33381	61.1229	67.4039	31.2328

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0017446 (v1.0)	Ranbp2	NM_011240	19386	6.54158	5.36901	3.63726

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0017446 (v1.0)	Ranbp2	NM_011240	19386	6.38523	3.30034	1.9823

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0017446 (v1.0)	Ranbp2	NM_011240	19386	6.54538	5.29547	2.17412

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0017446 (v1.0)	Ranbp2	NM_011240	19386	56.5903	65.0812	62.3688

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0017446 (v1.0)	Ranbp2	NM_011240	19386	3.4057	31.8904

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0017446 (v1.0)	Ranbp2	NM_011240	19386	0.541932	2.40009

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0017446 (v1.0)	14938	J0913F03-3		Ranbp2	19386			Ranbp2				3.0771	2.882	3.1335	3.0348	3.5357	3.222	3.2896
0017446 (v1.0)	14982	J0942G10-3	Mm.142730	Ranbp2	19386	U043077	NAP002730-001	Ranbp2;	TC837054	Q61992	U,F,2	3.4878	3.3573	3.5815	3.9283	3.405	3.4501	3.427
0017446 (v1.0)	18315	L0079F02-3	Mm.142730	Ranbp2	19386	U043077	NAP002730-001	Ranbp2;	TC837054	Q61992	U,F,2	3.4339	3.2969	3.5308	3.9237	3.3888	3.4422	3.3844

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0017446 (v1.0)	1422621_at	Mm.431695	Ranbp2	NM_011240.3	19386	188.05	152.35	492.125	337.1	220.425
0017446 (v1.0)	1440104_at	Mm.431695	Ranbp2	NM_011240.3	19386	0	0	0	128.675	0

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0017446 (v1.0)	A_51_P511375	Ranbp2	NM_011240	19386	1	1	P	0.583	0.118	P
0017446 (v1.0)	A_52_P176234	Ranbp2	NM_011240	19386	1	1	P	1.663	0.142	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0017446 (v1.0)	Ranbp2	19386	0	1	0	0	1	0