DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017556
GeneRbm38
SynonymsRnpc1
Seb4l
DescriptionRNA binding motif protein 38
LocusNM_019547 UCSC: chr2:172847403-172860232(+) OLP: chr2:172847403-172860232(+)
DB links


Entrez 56190
MGI 1889294
Ensembl ENSMUSG00000027510
Vega OTTMUSG00000016681
Featureprotein-coding
GO_BP
  •   11 Terms
      mRNA processing (GO:0006397)
      DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest (GO:0006977)
      DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator (GO:0006978)
      cell cycle (GO:0007049)
      cell cycle arrest (GO:0007050)
      negative regulation of cell proliferation (GO:0008285)
      RNA splicing (GO:0008380)
      regulation of myotube differentiation (GO:0010830)
      cell differentiation (GO:0030154)
      regulation of RNA splicing (GO:0043484)
      3'-UTR-mediated mRNA stabilization (GO:0070935)
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2018072 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017556
(v1.0)		Rbm38NM_01954756190
220.204259.55534.87958.455841.24924
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017556
(v1.0)		Rbm38NM_01954756190
230.2432.29797283.18
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017556
(v1.0)		Rbm38NM_01954756190
224.74256.949558.495
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017556
(v1.0)		Rbm38NM_01954756190
230.3772.2665612.539
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017556
(v1.0)		Rbm38NM_01954756190
32.2938.1644517.0924
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017556
(v1.0)		Rbm38NM_01954756190
128.79172.07
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017556
(v1.0)		Rbm38NM_01954756190
888.313244.022
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017556
(v1.0)		14904J0904H02-3Mm.3865Rnpc156190
U002908NAP099719-001Rnpc1;Seb4l;TC882550,TC831568,TC831567Q62176U,F,24.84064.99454.42484.13063.69423.70733.494
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017556
(v1.0)		1421265_a_atMm.485782Rbm38NM_019547.256190
386.7619.225477.264.433.6
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0017556
(v1.0)		A_51_P262670Rnpc1NM_01954756190
11P0.8830.43P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017556
(v1.0)		Rbm3856190
201402