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DB status: OK
Last modified: 2024/03/24

Gene Search:

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DBTMEE:0017612

Gene	Rdbp
Synonyms	NELF-E
Description	RD RNA-binding protein
Locus	NM_138580 UCSC: chr17:34987336-34993317(+) OLP: chr17:34987336-34993317(+) NM_001045864 UCSC: chr17:34987336-34993317(+) OLP: chr17:34987336-34993317(+) NM_001045863 UCSC: chr17:34987336-34993317(+) OLP: chr17:34987336-34993317(+)
DB links	Entrez 27632 MGI 102744 Ensembl ENSMUSG00000024369 Vega OTTMUSG00000037262
Feature	protein-coding
GO_BP	3 Terms transcription, DNA-dependent (GO:0006351) regulation of transcription, DNA-dependent (GO:0006355) negative regulation of transcription elongation from RNA polymerase II promoter (GO:0034244)
GO_MF	4 Terms nucleotide binding (GO:0000166) nucleic acid binding (GO:0003676) RNA binding (GO:0003723) protein binding (GO:0005515)
GO_CC	3 Terms nucleus (GO:0005634) mitochondrion (GO:0005739) NELF complex (GO:0032021)
KEGG
Ver2_FPKM	see  (v2.0)
SPR_Histone_Erkek_5KaroundTSS	N/A
SPR_Histone_Erkek_2KaroundTSS	N/A
SPR_Methy_Kobayashi_5KaroundTSS	N/A
SPR_Methy_Kobayashi_2KaroundTSS	N/A
SOLiD_OocyteTo4C_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez SPR_FPKM Oo_FPKM 1C_FPKM 2C_FPKM 4C_FPKM MEF_FPKM 0017612 (v1.0) Rdbp NM_001045863,NM_001045864,NM_138580 27632 52.2077 13.9806 67.1283 64.7374 23.5735
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez Oo_FPKM SPR_FPKM 1C_FPKM 0017612 (v1.0) Rdbp NM_001045863,NM_001045864,NM_138580 27632 54.5879 30.6538 15.2532
SOLiD_Partheno1C_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez Oo_FPKM 1C_FPKM p1C_FPKM 0017612 (v1.0) Rdbp NM_001045863,NM_001045864,NM_138580 27632 53.2832 13.8402 18.9233
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez Oo_FPKM SPR_FPKM p1C_FPKM 0017612 (v1.0) Rdbp NM_001045863,NM_001045864,NM_138580 27632 54.6197 30.234 20.7544
SOLiD_Partheno4C_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez 2C_FPKM 4C_FPKM p4C_FPKM 0017612 (v1.0) Rdbp NM_001045863,NM_001045864,NM_138580 27632 62.1503 62.5066 56.5011
Illumina_Oo_2C_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez Oo_FPKM 2C_FPKM 0017612 (v1.0) Rdbp NM_001045863,NM_001045864,NM_138580 27632 8.62013 30.2238
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez Oo_1_1 Oo_2_1 0017612 (v1.0) Rdbp NM_001045863,NM_001045864,NM_138580 27632 0.316888 1.03924
NIA60mer	DBTMEE Array_Feature_Number Oligo_Parent_Clone Unigene Gene Entrez U_Cluster NAP_Cluster Gene_U/NAP TIGR SwissProt EST Oo 1C 2C 4C 8C Morula Blastocyst 0017612 (v1.0) 6465 H3025E10-3 Mm.138450 Rdbp 27632 U017872 NAP098073-001 D17H6S45; TC909810,TC909809,TC909808,TC909807 P19426 3.0876 3.1655 3.7389 4.2822 3.655 3.855 3.5697
MOE430	DBTMEE Probe_ID Unigene Gene RefSeq Entrez Oo 1C 2C 8C Blastocyst 0017612 (v1.0) 1450705_at Mm.279907 Rdbp NM_001045864.1,NM_001045863.1,NM_138580.2 27632 500.675 117.525 365 311.3 150
Agilent44K	DBTMEE Probe_ID Gene Acc Entrez Oo1_xFold Oo1_pVal Oo1_Flag Oo2_xFold Oo2_pVal Oo2_Flag 0017612 (v1.0) A_52_P110270 Rdbp NM_138580 27632 1 1 P 1.051 0.774 P
Proteome	N/A