DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0017805

Gene

Rhpn2

Synonyms

D7Ertd784e

Description

rhophilin, Rho GTPase binding protein 2

Locus

NM_027897 UCSC: chr7:36119256-36177306(+) OLP: chr7:36119256-36177306(+)

DB links

Entrez 52428
MGI 1289234
Ensembl ENSMUSG00000030494
Vega OTTMUSG00000024889

Feature

protein-coding

GO_BP

1 Terms

GO_MF

GO_CC

2 Terms

KEGG

see DBTMEE:2018325 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0017805 (v1.0)	Rhpn2	NM_027897	52428	537.974	873.26	234.306	50.1341	0.295552

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0017805 (v1.0)	Rhpn2	NM_027897	52428	562.501	0.439543	952.745

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0017805 (v1.0)	Rhpn2	NM_027897	52428	549.057	864.491	813.875

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0017805 (v1.0)	Rhpn2	NM_027897	52428	562.828	0.433523	892.631

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0017805 (v1.0)	Rhpn2	NM_027897	52428	216.931	48.4065	64.2266

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0017805 (v1.0)	Rhpn2	NM_027897	52428	189.997	95.6954

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0017805 (v1.0)	Rhpn2	NM_027897	52428	293.891	486.315

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0017805 (v1.0)	9294	H3079C07-3	Mm.35465	D7Ertd784e	52428	U007967	NAP092753-001	1300002E07Rik;D7Ertd784e;	TC930299,TC854746	Q9DBN2	U,F,2	3.7031	3.6411	3.8619	3.6827	3.335	3.5972	3.3099
0017805 (v1.0)	14622	J0730F02-3	Mm.35465	D7Ertd784e	52428	U007967	NAP056739-1	1300002E07Rik;D7Ertd784e;	TC930299,TC854746	Q9DBN2	U,F,2	4.1983	4.165	3.0687	2.8967	2.2426	2.297	2.5031

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0017805 (v1.0)	1431805_a_at	Mm.286600	Rhpn2	NM_027897.4	52428	1233.22	2348.4	1529.68	34.95	83.675
0017805 (v1.0)	1434628_a_at	Mm.286600	Rhpn2	NM_027897.4	52428	2145.4	3747.9	2655.82	45.65	140.775

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0017805 (v1.0)	A_51_P135012	Rhpn2	NM_027897	52428	1	1	P	0.935	0.621	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0017805 (v1.0)	Rhpn2	52428	14	15	11	17	25	27