DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0017832

Gene

Riok1

Synonyms

Description

RIO kinase 1 (yeast)

Locus

NM_024242 UCSC: chr13:38128858-38153302(+) OLP: chr13:38128858-38153302(+)

DB links

Entrez 71340
MGI 1918590
Ensembl ENSMUSG00000021428

Feature

protein-coding

GO_BP

2 Terms

GO_MF

7 Terms

GO_CC

KEGG

1 Terms

see DBTMEE:2018352 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0017832 (v1.0)	Riok1	NM_024242	71340	204.237	249.565	14.4341	13.9589	6.73239

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0017832 (v1.0)	Riok1	NM_024242	71340	213.549	1.55006	272.28

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0017832 (v1.0)	Riok1	NM_024242	71340	208.445	247.059	234.174

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0017832 (v1.0)	Riok1	NM_024242	71340	213.673	1.52883	256.834

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0017832 (v1.0)	Riok1	NM_024242	71340	13.3638	13.4779	16.2155

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0017832 (v1.0)	Riok1	NM_024242	71340	228.868	8.4739

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0017832 (v1.0)	Riok1	NM_024242	71340	150.567	157.354

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0017832 (v1.0)	4645	C0946A08-3	Mm.196825	5430416A05Rik	71340		NAP047068-1		TC837884			3.8854	4.2169	4.6861	4.4522	3.9631	4.3338	4.0527
0017832 (v1.0)	11772	H3122G12-3	Mm.196825	5430416A05Rik	71340	U014736	NAP091664-1	3110046C13Rik;5430416A05Rik;	TC810357	Q9CU84	U,F,2	4.0928	4.131	3.5737	3.4805	3.1745	3.3805	3.2657
0017832 (v1.0)	20429	L0546A09-3	Mm.196825	5430416A05Rik	71340		NAP100308-001					2.5142	2.6197	2.6832	2.5348	2.3714	2.407	2.2147

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0017832 (v1.0)	1449346_s_at	Mm.297130	Riok1	NM_024242.3	71340	1101.65	1510.2	391.075	152.3	112.175
0017832 (v1.0)	1459851_x_at	Mm.297130	Riok1	NM_024242.3	71340	1442.2	1687.72	0	0	0

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0017832 (v1.0)	A_51_P498242	Riok1	NM_024242	71340	1	1	P	0.912	0.524	P
0017832 (v1.0)	A_52_P126146	Riok1	NM_024242	71340	1	1	P	0.677	0.16	P
0017832 (v1.0)	A_52_P74183	Riok1	NM_024242	71340	1	1	P	0.958	0.741	P

N/A