DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017846
GeneRlim
SynonymsHa1r
Rnf12
Descriptionring finger protein, LIM domain interacting
LocusNM_011276 UCSC: chrX:101152506-101176623(-) OLP: chrX:101152506-101176623(-)
DB links


Entrez 19820
MGI 1342291
Ensembl ENSMUSG00000056537
Vega OTTMUSG00000018399
Featureprotein-coding
GO_BP
  •   7 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      ubiquitin-dependent protein catabolic process (GO:0006511)
      protein ubiquitination (GO:0016567)
      negative regulation of sequence-specific DNA binding transcription factor activity (GO:0043433)
      random inactivation of X chromosome (GO:0060816)
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2018367 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017846
(v1.0)		RlimNM_01127619820
54.122682.0136106.23764.03428.9077
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017846
(v1.0)		RlimNM_01127619820
56.59024.0598889.4786
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017846
(v1.0)		RlimNM_01127619820
55.237681.190162.1432
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017846
(v1.0)		RlimNM_01127619820
56.6234.0042868.1565
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017846
(v1.0)		RlimNM_01127619820
98.358961.827492.4208
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017846
(v1.0)		RlimNM_01127619820
55.796866.6431
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017846
(v1.0)		RlimNM_01127619820
10.118911.4207
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017846
(v1.0)		10356H3094F09-3Mm.44069Rnf1219820
U039604NAP120907-001Ha1r;Rnf12;TC920885,TC920883,TC920882Q91X19U,F,23.28823.18733.37023.3893.35113.29073.2974
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017846
(v1.0)		1417250_atMm.427762RlimNM_011276.319820
187.05272.975257.275233.1363.425
0017846
(v1.0)		1418730_atMm.427762RlimNM_011276.319820
213.4250536.700
0017846
(v1.0)		1439403_x_atMm.427762RlimNM_011276.319820
135.55237.375215.875250.65239.15
0017846
(v1.0)		1440850_atMm.427762RlimNM_011276.319820
000233.75355.45
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0017846
(v1.0)		A_51_P363668Rnf12NM_01127619820
11P1.0440.739P
0017846
(v1.0)		A_52_P450045Rnf12NM_01127619820
11P1.0760.599P
Proteome N/A