DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0017927

Gene

Rnf2

Synonyms

dinG
Ring1B

Description

ring finger protein 2

Locus

NM_011277 UCSC: chr1:153316536-153347953(-) OLP: chr1:153316536-153347953(-)

DB links

Entrez 19821
MGI 1101759
Ensembl ENSMUSG00000026484

Feature

protein-coding

GO_BP

8 Terms

GO_MF

7 Terms

GO_CC

8 Terms

KEGG

see DBTMEE:2018454 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0017927 (v1.0)	Rnf2	NM_011277	19821	85.8991	95.2564	104.182	102.026	11.2958

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0017927 (v1.0)	Rnf2	NM_011277	19821	89.8154	2.84015	103.927

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0017927 (v1.0)	Rnf2	NM_011277	19821	87.6687	94.3	74.9585

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0017927 (v1.0)	Rnf2	NM_011277	19821	89.8676	2.80125	82.212

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0017927 (v1.0)	Rnf2	NM_011277	19821	96.4562	98.5097	85.8244

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0017927 (v1.0)	Rnf2	NM_011277	19821	66.7334	72.2183

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0017927 (v1.0)	Rnf2	NM_011277	19821	28.0502	44.7577

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0017927 (v1.0)	5165	Y12880.1		Rnf2	19821	U021884	NAP003427-001	Rnf2;	TC904137,TC904134,TC904133	O35699	U,F,2	2.6477	2.5371	1.901	2.2003	2.3212	2.2549	2.3039
0017927 (v1.0)	8156	H3060G06-3	Mm.31512	Rnf2	19821	U021884	NAP003427-001	Rnf2;	TC904134,TC904133	O35699	U,F,2	3.7348	3.6968	3.0936	3.2538	3.086	3.0442	3.1181
0017927 (v1.0)	9083	H3076C04-3	Mm.31512	Rnf2	19821	U021884	NAP003427-001	Rnf2;	TC904134,TC904133	O35699	U,F,2	3.1581	3.2674	3.2976	3.0826	2.6748	2.9357	2.7191

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0017927 (v1.0)	1451519_at	Mm.482250	Rnf2	NM_011277.2	19821	590.45	573.4	682.8	422.225	330.8

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0017927 (v1.0)	A_51_P382253	Rnf2	NM_011277	19821	1	1	P	0.716	0.185	P
0017927 (v1.0)	A_52_P149743	Rnf2	NM_011277	19821	1	1	P	1.006	0.959	P

N/A