| Gene | Rnf220 |
| Synonyms | |
| Description | ring finger protein 220 |
| Locus | NM_025739 UCSC: chr4:116944069-117169520(-) OLP: chr4:116944069-117169520(-)
|
| DB links |
Entrez 66743
MGI 1913993
Ensembl ENSMUSG00000028677
Vega OTTMUSG00000008570
|
| Feature | protein-coding |
| GO_BP |
-
 2 Terms
|
| GO_MF |
-
5 Terms
|
| GO_CC |
-
1 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2018463 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0017936
(v1.0) | Rnf220 | NM_025739 | 66743
| 111.558 | 114.692 | 24.315 | 10.7533 | 7.35351 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0017936
(v1.0) | Rnf220 | NM_025739 | 66743
| 116.644 | 10.135 | 125.132 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0017936
(v1.0) | Rnf220 | NM_025739 | 66743
| 113.856 | 113.54 | 146.057 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0017936
(v1.0) | Rnf220 | NM_025739 | 66743
| 116.712 | 9.99622 | 160.19 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0017936
(v1.0) | Rnf220 | NM_025739 | 66743
| 22.5119 | 10.3827 | 14.3948 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0017936
(v1.0) | Rnf220 | NM_025739 | 66743
| 72.1131 | 42.0349 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0017936
(v1.0) | Rnf220 | NM_025739 | 66743
| 84.0768 | 76.6156 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0017936
(v1.0) | 5677 | H3005B01-3 | Mm.28286 | 4931406I20Rik | 66743
| U025431 | NAP096714-001 | 4931406I20Rik; | TC935341,TC935333,TC935332 | Q9D4L6 | U,F,2 | 4.3991 | 4.4203 | 3.8243 | 3.9156 | 3.7123 | 3.7605 | 3.9389 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0017936
(v1.0) | 1415717_at | Mm.318331 | Rnf220 | NM_025739.2 | 66743
| 387.475 | 494.2 | 334.65 | 0 | 150.45 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0017936
(v1.0) | A_51_P152222 | 4931406I20Rik | NM_025739 | 66743
| 1 | 1 | P | 0.836 | 0.382 | P |
0017936
(v1.0) | A_52_P418734 | 4931406I20Rik | NM_025739 | 66743
| 1 | 1 | P | 1.029 | 0.823 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0017936
(v1.0) | Rnf220 | 66743
| 1 | 1 | 0 | 1 | 1 | 0 |
|
