DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0018040

Gene

Rpl35

Synonyms

Description

ribosomal protein L35

Locus

NM_025592 UCSC: chr2:38857101-38860651(-) OLP: chr2:38857101-38860651(-)

DB links

Entrez 66489
MGI 1913739
Ensembl ENSMUSG00000062997
Vega OTTMUSG00000012348

Feature

protein-coding

GO_BP

GO_MF

GO_CC

2 Terms

KEGG

1 Terms

see DBTMEE:2018568 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0018040 (v1.0)	Rpl35	NM_025592	66489	633.712	28.3063	841.439	2026.14	941.693

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0018040 (v1.0)	Rpl35	NM_025592	66489	662.604	682.513	30.8828

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0018040 (v1.0)	Rpl35	NM_025592	66489	646.767	28.0221	31.2806

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0018040 (v1.0)	Rpl35	NM_025592	66489	662.989	673.165	34.3076

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0018040 (v1.0)	Rpl35	NM_025592	66489	779.042	1956.32	1873

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0018040 (v1.0)	Rpl35	NM_025592	66489	121.096	261.799

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0018040 (v1.0)	Rpl35	NM_025592	66489	19.7138	9.3061

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0018040 (v1.0)	11456	H3115G05-3	Mm.16423	Rpl35	66489	U022573	NAP095150-001		TC824406,TC824390,TC824383,TC824379		U,F,2	3.7068	3.4621	3.9611	4.4851	4.6325	4.5286	4.5736

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0018040 (v1.0)	1416243_a_at	Mm.345333	Rpl35	NM_025592.3	66489	856.55	0	547.65	1471.12	1105.15
0018040 (v1.0)	1434231_x_at	Mm.345333	Rpl35	NM_025592.3	66489	3290.93	275.275	1751.2	6207.88	3951.77
0018040 (v1.0)	1454856_x_at	Mm.345333	Rpl35	NM_025592.3	66489	1700.4	167.65	1018.42	3464.07	2137.8
0018040 (v1.0)	1436840_x_at	Mm.345333	Rpl35	NM_025592.3	66489	2521.12	199.525	1501.38	5184.25	3257.68
0018040 (v1.0)	1455950_x_at	Mm.345333	Rpl35	NM_025592.3	66489	2583.32	222.175	1612.15	4994.7	3268
0018040 (v1.0)	1454833_at	Mm.345333	Rpl35	NM_025592.3	66489	0	0	0	61.85	0

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0018040 (v1.0)	A_51_P132715	Rpl35	NM_025592	66489	1	1	P	1.087	0.557	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0018040 (v1.0)	Rpl35	66489	1	3	1	3	13	1