DBTMEE:0018099
| Gene | Rps21 |
| Synonyms | |
| Description | ribosomal protein S21 |
| Locus | NM_025587 UCSC: chr2:179992084-179993149(+) OLP: chr2:179992084-179993149(+)
|
| DB links |
Entrez 66481
MGI 1913731
Ensembl ENSMUSG00000039001
Vega OTTMUSG00000016278
|
| Feature | protein-coding |
| GO_BP |
-
 5 Terms
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000447)
endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000461)
translation (GO:0006412)
translational elongation (GO:0006414)
ribosomal small subunit biogenesis (GO:0042274)
|
| GO_MF |
-
2 Terms
|
| GO_CC |
-
6 Terms
|
| KEGG |
-
1 Terms
|
| Ver2_FPKM |
see DBTMEE:2018627 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0018099
(v1.0) | Rps21 | NM_025587 | 66481
| 72.565 | 18.1268 | 532.706 | 953.895 | 526.153 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0018099
(v1.0) | Rps21 | NM_025587 | 66481
| 75.8734 | 1204.47 | 19.7767 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0018099
(v1.0) | Rps21 | NM_025587 | 66481
| 74.0599 | 17.9448 | 17.1831 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0018099
(v1.0) | Rps21 | NM_025587 | 66481
| 75.9175 | 1187.97 | 18.8459 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0018099
(v1.0) | Rps21 | NM_025587 | 66481
| 493.203 | 921.024 | 937.975 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0018099
(v1.0) | Rps21 | NM_025587 | 66481
| 13.0209 | 920.025 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0018099
(v1.0) | Rps21 | NM_025587 | 66481
| 64.9021 | 76.707 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0018099
(v1.0) | 11328 | H3112F04-3 | | 2410030A14Rik | 66481
| U002953 | NAP094779-001 | 2410030A14Rik; | TC874036,TC874032,TC874029,TC874028,TC874025,TC874017,TC874016,TC874015,TC874010 | Q9CQR2 | U,F,2 | 3.5314 | 3.4743 | 3.8546 | 4.5841 | 5.2028 | 5.0508 | 5.137 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0018099
(v1.0) | 1433721_x_at | Mm.289669 | Rps21 | NM_025587.2 | 66481
| 1254.62 | 139.875 | 1419.8 | 5641.7 | 4607.67 |
0018099
(v1.0) | 1433549_x_at | Mm.289669 | Rps21 | NM_025587.2 | 66481
| 297.75 | 41.475 | 433.975 | 1446.3 | 778.275 |
0018099
(v1.0) | 1434358_x_at | Mm.289669 | Rps21 | NM_025587.2 | 66481
| 866.8 | 159.375 | 1180.18 | 3749.07 | 2998.57 |
0018099
(v1.0) | 1439415_x_at | Mm.289669 | Rps21 | NM_025587.2 | 66481
| 101.95 | 0 | 128.15 | 374.375 | 191.6 |
0018099
(v1.0) | 1430288_x_at | Mm.289669 | Rps21 | NM_025587.2 | 66481
| 3787.43 | 504.85 | 4073.25 | 20603.4 | 19439.8 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0018099
(v1.0) | A_51_P489959 | Rps21 | NM_025587 | 66481
| 1 | 1 | P | 0.777 | 0.24 | P |
0018099
(v1.0) | A_52_P678800 | Rps21 | AK010610 | 66481
| 1 | 1 | P | 0.59 | 0.119 | P |
0018099
(v1.0) | A_52_P740562 | Rps21 | NM_025587 | 66481
| 1 | 1 | P | 0.451 | 0.0793 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0018099
(v1.0) | Rps21 | 66481
| 0 | 1 | 1 | 0 | 1 | 6 |
|
