DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0018137

Gene

Rraga

Synonyms

FIP-1

Description

Ras-related GTP binding A

Locus

NM_178376 UCSC: chr4:86221577-86223187(+) OLP: chr4:86221577-86223187(+)

DB links

Entrez 68441
MGI 1915691
Ensembl ENSMUSG00000070934
Vega OTTMUSG00000007449

Feature

protein-coding

GO_BP

7 Terms

GO_MF

5 Terms

GO_CC

5 Terms

KEGG

see DBTMEE:2018667 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0018137 (v1.0)	Rraga	NM_178376	68441	160.327	232.608	6.10543	6.56257	21.2811

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0018137 (v1.0)	Rraga	NM_178376	68441	167.637	11.0585	253.78

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0018137 (v1.0)	Rraga	NM_178376	68441	163.63	230.272	271.172

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0018137 (v1.0)	Rraga	NM_178376	68441	167.734	10.9071	297.412

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0018137 (v1.0)	Rraga	NM_178376	68441	5.65267	6.33642	9.7531

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0018137 (v1.0)	Rraga	NM_178376	68441	209.531	4.67307

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0018137 (v1.0)	Rraga	NM_178376	68441	10.7034	28.2269

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0018137 (v1.0)	6006	H3014F11-3	Mm.31178	1300010C19Rik	68441	U004742	NAP003880-001	C330039G02Rik	TC805703		U,F,2	3.7592	4.2404	4.0644	4.1795	3.1929	3.3588	3.4153
0018137 (v1.0)	15629	K0216B09-3	Mm.31178	1300010C19Rik	68441	U004462	NAP008760-001		TC836868		U,F,2	3.2141	3.2156	2.559	2.6297	2.4186	2.4353	2.6593

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0018137 (v1.0)	1428905_at	Mm.31178	Rraga	NM_178376.3	68441	359.275	854.6	74.475	88.65	157.325

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0018137 (v1.0)	A_51_P226417	Rraga	NM_178376	68441	1	1	P	0.672	0.157	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0018137 (v1.0)	Rraga	68441	4	5	0	7	9	0