DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0018314

Gene

Sart3

Synonyms

Description

squamous cell carcinoma antigen recognized by T cells 3

Locus

NM_016926 UCSC: chr5:114192455-114221658(-) OLP: chr5:114192455-114221658(-)

DB links

Entrez 53890
MGI 1858230
Ensembl ENSMUSG00000018974

Feature

protein-coding

GO_BP

1 Terms

GO_MF

3 Terms

GO_CC

4 Terms

KEGG

see DBTMEE:2018847 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0018314 (v1.0)	Sart3	NM_016926	53890	89.0348	19.8494	10.2777	7.57497	7.76455

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0018314 (v1.0)	Sart3	NM_016926	53890	93.094	2.5658	21.6561

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0018314 (v1.0)	Sart3	NM_016926	53890	90.869	19.6501	24.327

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0018314 (v1.0)	Sart3	NM_016926	53890	93.1481	2.53066	26.6811

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0018314 (v1.0)	Sart3	NM_016926	53890	9.51552	7.31393	9.47553

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0018314 (v1.0)	Sart3	NM_016926	53890	206.022	12.7635

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0018314 (v1.0)	Sart3	NM_016926	53890	63.0632	37.5682

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0018314 (v1.0)	938	C0163A04-3	Mm.29594	Sart3	53890							4.0395	4.0209	3.4758	3.8457	3.4192	3.6156	3.607
0018314 (v1.0)	19715	L0295A04-3	Mm.29594	Sart3	53890	U026591	NAP003299-001	Sart3;	TC858437,TC858436	Q9R0P4	U,F,2	4.2403	4.1722	3.6345	4.0329	3.522	3.7261	3.7452

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0018314 (v1.0)	1417547_at	Mm.29594	Sart3	NM_016926.1	53890	877.95	819.35	244.75	381.7	238.375

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0018314 (v1.0)	A_51_P212023	Sart3	NM_016926	53890	1	1	P	0.692	0.168	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0018314 (v1.0)	Sart3	53890	2	14	3	2	17	5