DBTMEE

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DBTMEE:0018420

Gene

Scnm1-ps

Synonyms

3110001I17Rik
Scnm1

Description

sodium channel modifier 1, pseudogene

Locus

NM_001163573 UCSC: chr3:94933641-94937934(-) OLP: chr3:94933641-94937934(-)
NM_027013 UCSC: chr3:94933641-94937934(-) OLP: chr3:94933641-94937934(-)

DB links

Entrez 69269
MGI 1341284
Ensembl ENSMUSG00000092607
Vega OTTMUSG00000022306

Feature

protein-coding

GO_BP

GO_MF

GO_CC

KEGG

Ver2_FPKM

see (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0018420 (v1.0)	Scnm1	NM_001163573,NM_027013	69269	39.0439	10.9653	35.7797	46.4897	18.6938

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0018420 (v1.0)	Scnm1	NM_001163573,NM_027013	69269	40.8239	10.0419	11.9634

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0018420 (v1.0)	Scnm1	NM_001163573,NM_027013	69269	39.8482	10.8552	19.4874

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0018420 (v1.0)	Scnm1	NM_001163573,NM_027013	69269	40.8477	9.90433	21.3731

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0018420 (v1.0)	Scnm1	NM_001163573,NM_027013	69269	33.1265	44.8877	59.7715

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0018420 (v1.0)	Scnm1	NM_001163573,NM_027013	69269	130.478	89.2713

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0018420 (v1.0)	Scnm1	NM_001163573,NM_027013	69269	2.97085	1.21017

NIA60mer

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0018420 (v1.0)	11820	H3123F04-3	Mm.182944	3110001I17Rik	69269	U024353	NAP034203-1		TC910123	Q9CXV5		3.094	2.9695	2.891	2.9818	3.1693	3.0373	3.1008

MOE430

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0018420 (v1.0)	1428364_at	Mm.182944	Scnm1	NM_027013.2,NM_001163573.1	69269	151.225	0	0	0	149.75

Agilent44K

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0018420 (v1.0)	A_51_P284597	Scnm1	NM_027013	69269	1	1	P	0.915	0.539	P

Proteome

N/A