DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018447
GeneSdc1
SynonymsCD138
syn-1
Synd
Synd1
Descriptionsyndecan 1
LocusNM_011519 UCSC: chr12:8778202-8800493(+) OLP: chr12:8778202-8800493(+)
DB links


Entrez 20969
MGI 1349162
Ensembl ENSMUSG00000020592
Vega OTTMUSG00000033390
Featureprotein-coding
GO_BP
  •   2 Terms
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2018987 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018447
(v1.0)
Sdc1NM_01151920969
59.34819.344713.15838.124840.1224
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018447
(v1.0)
Sdc1NM_01151920969
62.053820.452921.1055
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018447
(v1.0)
Sdc1NM_01151920969
60.570719.150521.8301
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018447
(v1.0)
Sdc1NM_01151920969
62.089920.172823.9425
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018447
(v1.0)
Sdc1NM_01151920969
12.18267.8448210.1372
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018447
(v1.0)
Sdc1NM_01151920969
0.6340.95981
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018447
(v1.0)
Sdc1NM_01151920969
58.081565.4081
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018447
(v1.0)
328C0101C01-3Mm.2580Sdc120969
Sdc13.45463.35653.23833.26713.20543.25173.2714
0018447
(v1.0)
5953H3013F05-3Mm.2580Sdc120969
U013744NAP003401-001Sdc1;TC940506P18828U,F,24.19783.81093.18063.06442.41482.68012.5138
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018447
(v1.0)
1415943_atMm.2580Sdc1NM_011519.220969
332.45485.275199.800
0018447
(v1.0)
1437279_x_atMm.2580Sdc1NM_011519.220969
457620.275203.9566.6523.675
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0018447
(v1.0)
A_52_P479269Sdc1NM_01151920969
11P1.3610.199P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018447
(v1.0)
Sdc120969
302303